DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and Magi

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster


Alignment Length:1322 Identity:225/1322 - (17%)
Similarity:389/1322 - (29%) Gaps:526/1322 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 FRVSFSINSEKLDLTKSDAKCSTSGGSGTASASKAPSSSRPMARSRARLL-RATGRSNSTGQGSG 130
            |..:.::||...:.:.....||.........|.:..::|:.::.:...:: ..:|..|.|..|:|
  Fly    93 FNGNSNLNSSLANGSSRKFNCSRDNVDDGGDAGEMAAASQTLSSAGTDVVGNGSGHGNGTVTGNG 157

  Fly   131 SRSTGVIIGGSTSSRPLVTVPATYVPEELISQAEVVLQGKSRNLIIRELQRTNLDVNLAVNNLLS 195
            .:|.|:...|....||    |.   |..|...|..|                       :.|..|
  Fly   158 EKSGGLAPPGGHHLRP----PP---PPALKKSASAV-----------------------IGNSAS 192

  Fly   196 RDDEEAEDTEEGADNYVPEDLISLLDNGFSGDNNSVIID-------PSDGLFSEEIFSNYSSIRN 253
            |                 ||:.||  :|.|..|:.:.:.       ||:|:.|..:....::.|.
  Fly   193 R-----------------EDVASL--SGTSSLNSQMSVHNQFISGLPSNGIGSNGVHGGAATGRG 238

  Fly   254 LLFDRIRSERSNANANAADSNQSTTRST-SSGTALTGNSGLSAQISV----NADREAFS------ 307
                      ...|:....|.::..::| .:|.  ||:|.|.::..|    :.:.|:..      
  Fly   239 ----------GPPNSILKGSKENLLQNTYYNGE--TGDSSLGSECGVGDVQHQNHESHDDPGDGL 291

  Fly   308 -----RW------RDRQYY-----GPRRWI----------SKDD-------YTWEKDADS----- 334
                 :|      |...|:     |...|:          |.:|       |.|||..||     
  Fly   292 GPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSKYQKKSLEDCCEDELPYGWEKIEDSMYGMY 356

  Fly   335 -------KKKEPSPMLSPIWISEE--------LQPWPEKSSVRFKTIGALYSEFIALSESGDLYQ 384
                   :.:..:|:|.....:.|        .|...:....|.||..|| ||.:. :|:.:.::
  Fly   357 FIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQQQMQEQRSKTPTAL-SETMP-TEAAEAHE 419

  Fly   385 WRWSDAEPYKSETENVYHPKTVSLNIVERVELISANFIRCSV----------VTETNRVAT---- 435
             :..|..|.|...:...:|..:....:....|.|:..:..::          |.|..::.|    
  Fly   420 -QEEDESPMKLPYKFTRNPAELQGQRINTTLLKSSRGLGFTIVGSDGSAGGDVEEFLQIKTVVPN 483

  Fly   436 ---WMDEQL--GYIGAKLEHSCC----------AFNEFISDSITKIYVCSLYTVVKTESNNIYWW 485
               |:|.||  |.:...:..:|.          .|...:......:.||..|.            
  Fly   484 GPAWLDGQLQTGDVLVYVNDTCVLGYTHHDMVNIFQSILPGERAALEVCRGYP------------ 536

  Fly   486 GVLPFD---------------------QRRFLWD---KFRTKTKKPFKVVATDINVGAQVIMKKC 526
              ||||                     |||...|   .|...:.:..|  .|..:....::|||.
  Fly   537 --LPFDPNDPNTEVVTTMAVDGRESDKQRRLNMDGNYNFLDLSGEGAK--KTSGSGSGFILMKKP 597

  Fly   527 PMY----QSGSIGFTCSNGVPKVGQLLNSVWTFTDVCRMKIININTNSGVDKSQAAGNNLNAHGI 587
            .:|    ..||:||..:......||::.           ||::.|..:.:.:....   |..:|:
  Fly   598 EIYTFSIMKGSMGFGFTIADSACGQIVK-----------KILDRNCCTQLMEGDVL---LEINGL 648

  Fly   588 TPDKDLPKSTAMPSTGSSKNGQSF---------SNSKESTDRIDMPPPPSPASSTCSDTGSVTSH 643
                            :.:|...|         |.:..:..:|...||..||::|.:        
  Fly   649 ----------------NVRNKPHFYVVELLKECSQTTPTAVKIQRTPPDPPANNTLA-------- 689

  Fly   644 KRTKRATTKEDSNAPQEGRKDEELWEVKDVVFVEDKVGPVGKVLKVDGDFVAVRFPAINAAAVAA 708
                                               ::..||.|.|:..:||.           :.
  Fly   690 -----------------------------------QLNQVGNVAKLRKNFVG-----------SG 708

  Fly   709 AAAATSSTSNTASTSKEEGKEDDWQQCRLL-----------RREDVQIFRTAMSTRGPDWLQKQP 762
            ...:.:.|::..||..:|          :|           ||..|||             |...
  Fly   709 LFRSKTPTADLYSTQVKE----------VLPMRPKTPLVDTRRSRVQI-------------QSPN 750

  Fly   763 KKINVGGD-AAGAQILTLAVDSRGIHVIKKVLGKIHYSLYNLYNCKQEQNCLFPTDCNSFIGSTP 826
            .:::..|| ||.|:...|.:.::         ||.:.||..|                       
  Fly   751 NEVDDEGDGAAAAERKPLQLQTQ---------GKSNSSLQEL----------------------- 783

  Fly   827 GNILMACNDD------------CSGNSSTIVLR-DGNGALY-----------PLAK-------DC 860
                    ||            .|...:.:.|: |.||.:|           |||.       ||
  Fly   784 --------DDIPYMDPYPKISRLSERLAEVTLQGDANGGIYGMPPSMQPLPLPLAHHESCYCYDC 840

  Fly   861 LGSIKDPQWFDLPPVKSITMSTISLPAMLSGVNLKSKVCMTALLFDTQKLMPHILRCDVKNSFAA 925
            ......|.:|           ..:..|.:||...:.....||.|                     
  Fly   841 QAQRYRPGYF-----------VQAQQAAMSGTTGQYSPLQTAHL--------------------- 873

  Fly   926 LGRLEREDQADTALVVEERCDGARNIFHACVIMCAPSSNKDSPPDSPSGGVEKKSLVGLSVARSI 990
              :.||..:....|:.:.|..|..|:.....:..:||....:..| .|...::..|..:::.|  
  Fly   874 --QNERIQRRVNELLSDRRRVGFANLDPPQQMQHSPSWRNGALLD-VSEDADQCELTEVTLER-- 933

  Fly   991 PTVSTSAYVSSIAFGASASSSNENSSFATMSSSAAGSASSTSRDNRTNLRDMMNRLINSDQAEQS 1055
                     .::.||.......|..|..|:.....|.|:  .:|.|.|..|   .:::.|...  
  Fly   934 ---------QALGFGFRIVGGTEEGSQVTVGHIVPGGAA--DQDQRINTGD---EILSIDGIN-- 982

  Fly  1056 GSQPMATNNEDHAYIPWPAETPAASNLSASSSQNVSDSIEDDISKIIPSSSQSSMLSNIKLGSPT 1120
                 ..|:..|                                |::....:|::...:      
  Fly   983 -----VLNSSHH--------------------------------KVVSLVGESALRGQV------ 1004

  Fly  1121 YTFDLAQRREHALTILQQMCVSPALRPYLCHMLSTKDAQGQTPFMLSVSCRAYEAGIILLNTILM 1185
             |..|.:||   ..:|||..||..||.|...::.::.......|::..|...|....|       
  Fly  1005 -TMILRRRR---TPLLQQAPVSTQLRRYPYDVIVSRHENEGFGFVIISSSNHYYGSTI------- 1058

  Fly  1186 LSEQDPQLKEAMIFPNGSPADQ 1207
                      ..:.| |||||:
  Fly  1059 ----------GKLIP-GSPADR 1069

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409 6/45 (13%)
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562
PolyA 2498..2561 CDD:197769
HECTc 2589..2885 CDD:238033
HECTc 2589..2884 CDD:214523
MagiNP_001286661.1 WW 294..323 CDD:278809 5/28 (18%)
WW 342..372 CDD:238122 7/29 (24%)
PDZ 443..534 CDD:214570 14/90 (16%)
DegQ <455..534 CDD:223343 12/78 (15%)
PDZ_signaling 606..668 CDD:238492 14/91 (15%)
PDZ 925..1011 CDD:214570 20/147 (14%)
PDZ_signaling 1029..1110 CDD:238492 10/59 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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