DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and Hace1

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:XP_006256657.1 Gene:Hace1 / 361866 RGDID:1306114 Length:916 Species:Rattus norvegicus


Alignment Length:1035 Identity:226/1035 - (21%)
Similarity:372/1035 - (35%) Gaps:340/1035 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  2049 ELPLD--------MAMPLADKPHL---LQPNSK----------RQELF---AN------LPLLVT 2083
            |||.|        |.|.:||:...   |..|||          ::.|.   ||      |.||:.
  Rat    22 ELPEDNETAVYTLMPMVMADQHRSVSELLSNSKFDVNYAFGRVKRSLLHIAANCGSVECLVLLLK 86

  Fly  2084 TNANNSGATNDGDGGSIFDYTPTRLGFSNSLKR-NERVYETVPIDSSKTGDGNVTNKAEGSTDSN 2147
            ..||    .|..|   |...||..|...|..|: ..::.|       .:.|.|:.|. ||.|..:
  Rat    87 KGAN----PNYQD---ISGCTPLHLAARNGQKKCMSKLLE-------YSADVNICNN-EGLTAIH 136

  Fly  2148 IYVQLKKKQGSDDFKSHKEADGNQSKYEKVVLMETDDSLPSTSKSTEALMATRPEVIIAPNKASV 2212
            ......:.:...|...|            |..::.:|::..|:.........:..|         
  Rat   137 WLAVNGRTELLHDLVQH------------VTDVDVEDAMGQTALHVACQNGHKTTV--------- 180

  Fly  2213 SPATAARSVIVLAGGSCLKTIDSDINNYSASNLSTAEQAKCDTQYQKSTSDHLLLFPARGSQFYQ 2277
                           .||....:|||..:.:. :|.....| :..|:.|:..|||   ||:::  
  Rat   181 ---------------QCLLDSGADINRPNVAG-ATPLYFAC-SHGQRDTAQILLL---RGAKY-- 223

  Fly  2278 SNFSELPSWNFLLSRWKLTLDL-----FG-----------RVFMDDVGMEHGSVLPELRGFPVKE 2326
                 ||..|.:     ..|||     :|           |:|...|.|.               
  Rat   224 -----LPDKNGV-----TPLDLCVQGGYGQTCEVLIQYHPRLFQTIVQMT--------------- 263

  Fly  2327 MRFRRHMEKLRNGQQRDLVLCKLERNRESLIVQTFKELNTQFGNQSRRIQPPI----TFNRVKVT 2387
                         |..||        ||:::.|..:.|:.|..:|..:|...:    |.|..|:.
  Rat   264 -------------QNEDL--------RENMLRQVLQHLSQQSESQYLKILTGLAEVATTNGHKLL 307

  Fly  2388 FKDEPGEGSGVAR------SFYTSIAEALLASAKI--------PNLES--VQVGTNHSKYVVPFS 2436
                     .|.|      |.|.:..::||...:|        |:..|  :.:|.|.:|  .|.|
  Rat   308 ---------SVFRLVSSLSSSYEAQMKSLLRIVRIFCHVFRIGPSSPSNGMDMGYNGNK--TPRS 361

  Fly  2437 SILRSRTVSGSSRDQ------STLQRRGSNSK-----ILWRSARERKALNLDARPYTPPNSSD-- 2488
            .:.:...:...|.|:      :.|.:...:|.     :|.:..::::|..:.|  :.||....  
  Rat   362 QVFKPLELLWHSLDEWLVLIATELMKNKEDSADITSILLKQKGQDQEASCISA--FEPPGPGSYE 424

  Fly  2489 -------NATPESL----------NDHLSVHLQQIGERLYPKIHSINQTHAPKITGMLLEIPTPQ 2536
                   .:.|:.|          .|.:||...::...:.......:....|.:|       :|:
  Rat   425 RLSTGPGESKPDVLAGKQEASADCQDVISVTANRLSAVIQAFYMCCSCQMPPGMT-------SPR 482

  Fly  2537 LLS-VISSDETLRQKVNEAIEII------------------------TFKQKSE---TSAQSSQP 2573
            .:. |...||.|:..||...:||                        .||.:.|   ....|.||
  Rat   483 FIEFVCKHDEVLKCFVNRNPKIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQP 547

  Fly  2574 KKSPSVVVVDPVDDDN------EPLFYSP---------------------GKRG----------- 2600
               .|.:|..||.:::      :.:|.|.                     |:.|           
  Rat   548 ---DSDMVHRPVSENDILLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFD 609

  Fly  2601 ----------------------FYTPRQGFASFERINAFRNIGRLIGLCLLQNELLPLFLQRHVL 2643
                                  |......:.:.:.:|.||..|:::||.|...:|:.::..|...
  Rat   610 ILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFY 674

  Fly  2644 KYILGRKIKFHDLAFFDPALYESFRQIIQNAQTKEGEETINRMELCF-----VIDLMKEEGCGNR 2703
            |:|||..:.:.|:|..||...::.:.|:.|..:..|      :||.|     |...|:|.     
  Rat   675 KHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLG------LELTFSVETDVFGAMEEV----- 728

  Fly  2704 ELIPGGRDVAVTSSNIFEYVRRYTEYRLIKSQEKALEALKDGVFDVLPDNSMINLTAE-DLRLLL 2767
            .|.|||..:.||.:|..|||:..||.|:.::.:..:.|...|....:|. |:|.|..| :|.|||
  Rat   729 PLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPP-SLIQLFDEYELELLL 792

  Fly  2768 NGVGDINVSTLISYTTFNDESSEGPDKLLKFKKWFWSIVEKMNIMERQDLVYFWTGSPALP---- 2828
            :|:.:|:|:..|.    |.|.:.|.::.....:|||.:||.|...||..|:.|.|||..:|    
  Rat   793 SGMPEIDVNDWIK----NTEYTSGYEREDPVIQWFWEVVEDMTQEERVLLLQFVTGSSRVPHGGF 853

  Fly  2829 ASEEGFQPLPSVTIR--PADDSHLPTANTCISRLYIPLYSSKSILRSKMLMAIKSKNFGF 2886
            |:..|...|.:.||.  |...:.|||::|||:.|.:|.|.||.||:.::|:|:...::|:
  Rat   854 ANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGY 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562
PolyA 2498..2561 CDD:197769 13/87 (15%)
HECTc 2589..2885 CDD:238033 97/367 (26%)
HECTc 2589..2884 CDD:214523 97/366 (27%)
Hace1XP_006256657.1 ANK repeat 66..95 CDD:293786 9/32 (28%)
ANK 66..93 CDD:197603 8/30 (27%)
Ank_2 69..194 CDD:289560 33/175 (19%)
ANK 92..217 CDD:238125 30/173 (17%)
ANK repeat 97..128 CDD:293786 8/37 (22%)
ANK repeat 130..161 CDD:293786 6/42 (14%)
Ank_2 135..222 CDD:289560 20/127 (16%)
ANK repeat 163..194 CDD:293786 7/54 (13%)
ANK repeat 196..221 CDD:293786 8/29 (28%)
Ank_4 199..249 CDD:290365 16/65 (25%)
HECTc 561..910 CDD:238033 97/364 (27%)
HECTc 586..909 CDD:214523 95/338 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.