DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and CG42797

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_572574.2 Gene:CG42797 / 31905 FlyBaseID:FBgn0261931 Length:1426 Species:Drosophila melanogaster


Alignment Length:1654 Identity:317/1654 - (19%)
Similarity:551/1654 - (33%) Gaps:545/1654 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1542 APVRLGVVRPTAPFTMSSSNLDVRNSDDLFSVDPLAPSNVESPSEQILVHDAGNDQSANFNIQQN 1606
            |||      |..|...||:.|..|:     .|||:|                             
  Fly     6 APV------PLQPLAASSACLADRS-----PVDPIA----------------------------- 30

  Fly  1607 YDVVAMETIRDASESEEVINREANSHNQDDELIENQRNEDGMQDDESDNDFTFNDAETESDSDDN 1671
                    :|        :.:|..:...|:|  |.:..||  .||:...:..|.:|...::||  
  Fly    31 --------VR--------LQQEEQAEGDDEE--EEEEEED--DDDDPKEEEAFYEARNGNESD-- 73

  Fly  1672 QSNQEVQRSVQAGATVGSENDIGVLFLEDESGDSSAQEEDGSEDGESDDQSDEFNFNEQQLERRS 1736
                |::::.|:..|:.::..:.|..:|:.....:::.::.:|..|          .:|||...:
  Fly    74 ----ELEQAFQSALTLTNDVHVSVSEVEEHEPPLASRNQEVAEVEE----------QQQQLGACA 124

  Fly  1737 TNSNARSDLAPQTMQWAIRSRDTARSSVRVPTGSNMVFIDPM------------------ALRRS 1783
            ....:.:.|.........|...|..|:....|.:|...:.|.                  |.|:|
  Fly   125 LPQPSEASLTGSKETREPRHHQTLLSTKSCETPANNATLSPTNSYNGSIGSDGGSSVGGGARRKS 189

  Fly  1784 -TVPASTTVTTP------SIEPHTMATTASNLARAFGITI---RQISELISILSYNVLNDIETSL 1838
             |:...:..:||      ..:.....||.|| |...|..:   |:..|.:.....:.|:..|...
  Fly   190 WTLSPQSGGSTPLSGAKKKTKTGAPTTTLSN-ANGDGFNLWVARECFETVPAEMVDTLSMAEVDE 253

  Fly  1839 KI---QNDEAIAVQAFVEKRLKATWDWMFTVMDGTEAQLKFGAYL---------TNYTDPNHPLH 1891
            ::   :::||.||::.:                |..|.|:..|::         .:...|:.|.|
  Fly   254 EVDEEEDEEAAAVESLL----------------GAAAALQASAHVQRRQQQQHHQHLRQPSPPQH 302

  Fly  1892 -PLNLS--------------------------------AQASSSQTPAPATSSSVNGVNIMGSNS 1923
             ||..|                                ||.|.|...:|..:..|....::....
  Fly   303 RPLERSWPPRAVGRDLKLQGDVFQFDILDTDERLAEEMAQGSGSSNNSPLATPPVRFKPLLKKKI 367

  Fly  1924 RRDFFTYCLSLMRSHTSEHRDALPVLDITALRHIAYVLDAFVYYMRNDSGFYDKQDTISGRINNL 1988
            ..|.:...:|..:         :||       |.:|....|.......|.        |...|:|
  Fly   368 GPDSYINTISTQK---------VPV-------HQSYEFPTFPSSSAVGSS--------SSSPNSL 408

  Fly  1989 S--------PMTESYDTDDELANLEEFNADVQMSAS---SMPSGSQGTRRHAFFARSESTLSLGC 2042
            .        |:|.:.......::.|:.:..:.:|..   |.|||..        .||.|.|.:..
  Fly   409 QFPYLRQHRPLTRALSNGKASSSEEQASPRLLLSPKRPRSPPSGCS--------TRSASPLDISL 465

  Fly  2043 SAPE--------GFELPLDMAMPLADKP-HLLQPNSKRQELFANLPLLVTTNANNSGATNDGDGG 2098
            | ||        |....|..|:|..... |..:|   :|.|...:     .....:|||....|.
  Fly   466 S-PEQHSPTRGRGVGGALQDAVPPGTPTFHGQRP---QQRLLKRV-----GGGAGAGATGGATGS 521

  Fly  2099 S-IFDYTPTRLGFSNSLKRNERVYETVPIDSSKTGDGNVTNKAEGSTDSNIYVQLK---KKQGSD 2159
            . :...|||     :..:|:.|: :.|..:||....|.:.:.....:....|:.|:   ::||  
  Fly   522 PLVCPPTPT-----HHARRHARL-QAVTANSSLASGGAIPSDPPAVSSQLDYIYLQDGGQEQG-- 578

  Fly  2160 DFKSHKEADGNQSKYEKVVLMETD--DSLP--STSKSTEALMATRPEVIIAPNKASVSPATAA-- 2218
                       |.:.::||.:.:.  .|:|  |.:.:..|..|.....::.|...:||.::.|  
  Fly   579 -----------QEQSDEVVHISSTRLPSIPERSAAAAAAAAAAAAGAALMEPGTGTVSGSSGAGA 632

  Fly  2219 ---------------------------------RSVIVLAGG-----------------SCLKTI 2233
                                             |.....:||                 |..:||
  Fly   633 AGEPPLPPAWEARMDSHGRIFYIDHTTRTTSWQRPGAAPSGGPAGREQHHRQQLDRRYQSIRRTI 697

  Fly  2234 DSDINNYSASNLSTAEQAKCDTQ------------------------------------YQKSTS 2262
            .::.......||.|:..:..::.                                    |.::.:
  Fly   698 TNESRAAQLYNLPTSANSNANSTAPAAPPPATAIHPAILMLCRPDFYSLLHTNEAALAIYNRNAA 762

  Fly  2263 -DHLLLFPARGS---QFYQSN---------FS----ELPSWNFLLSRWKLTLDLFGRVFMDDVGM 2310
             .|:::...|..   |.||.|         |:    ||||.      |:..||..|:.|..|...
  Fly   763 LKHMVMRIRRDPPCFQRYQYNKDLVALVNTFAQMSRELPSC------WETKLDQSGKQFFIDHQH 821

  Fly  2311 EHGSVL-PELRGFPVKEMRFRRHMEKLRNGQQR--------DLVLCKLERNRESLIVQTFKELNT 2366
            ...|.: |.|   ||:..|..||.:  ::.||:        |||       ..:.:..|...:|.
  Fly   822 RRTSFMDPRL---PVECPRVVRHRQ--QHSQQQSSVGYYYPDLV-------DGNCLSATSGHINA 874

  Fly  2367 QFGNQSRRIQPPITFNRVKVTFKDEPGEGSGVARSFY--------TSIAEALL------------ 2411
            ...:....: ||:...|        |...|..:||.:        ||.....|            
  Fly   875 SPASSVSGV-PPLPPPR--------PSSSSSSSRSSHGHGHNCNTTSAISCALNADRSAYGAAGM 930

  Fly  2412 --ASAKIPNLESVQVGTNHSKYVVPFSSILRSRTVSGSSRDQSTLQRRGSNSKILWRSARER-KA 2473
              |.|.....|.|.:..|..  |:.|   ||...:....|     :|:|.::  :.|..||: ..
  Fly   931 ASAGATAAGYEDVPIAYNEK--VIAF---LRQPNILEILR-----ERQGQHT--MSRQLREKINI 983

  Fly  2474 LNLDARPYTPPNSSDNATPESLNDHLSVHLQQIGERLYPKIHSINQTHAPKITGML-LEIPTPQL 2537
            |.::..|                     .|:::|..|  ::..:......:|.|.: :|..:||.
  Fly   984 LRVEGVP---------------------ALERLGHDL--QLTILLSLFEQEIMGFVPIEERSPQG 1025

  Fly  2538 LSVISSDETLR-----QKVNEAIEIITFKQKSETSAQSSQPKKSP--------------SVVVVD 2583
            ..|::|....|     ::..|| ::.:|.:|.|:......|.|..              .::..:
  Fly  1026 SPVLNSRMPQRAPPPFRRDFEA-KLRSFYRKLESKGYGQGPHKLKLHIRRSHLLEDAFRRIMSAN 1089

  Fly  2584 PVD----------DDNEPLFYSPGKRGF--------YTPRQGFASFERINA-------------- 2616
            ..|          |..|.|.|....|.|        :.|..|...:...:.              
  Fly  1090 KKDLQRGRLAVLWDTEEGLDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPLSAFVDN 1154

  Fly  2617 ----FRNIGRLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHDLAFFDPALYESFRQIIQNAQTK 2677
                ||..||::||.|:...||..|..|...|.:|...:...||...|...::|.:.|..|    
  Fly  1155 CHDWFRFSGRVLGLALVHQYLLDAFFTRPFYKALLRLPVALSDLESLDNEFHQSLQWIRDN---- 1215

  Fly  2678 EGEETINRMELCFVIDL-----MKEEGCG---NRELIPGGRDVAVTSSNIFEYVRRYTEYRLIKS 2734
                     ::...:||     :.||..|   :|||.|||:::.:...|..||:.|..::||.:.
  Fly  1216 ---------DIGTGVDLGLTFCVTEELLGSVVDRELKPGGKNIIINEKNKKEYLERMIKWRLERG 1271

  Fly  2735 QEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYTTFNDESSEGPDKLLKFK 2799
            .::..|:|..|.::|:....:....|.:|.|::.|..:|:.:.    ...|.|...|.....:..
  Fly  1272 VQEQTESLVRGFYEVIDSRLVSVFDARELELVIAGTAEIDTND----WRLNTEYRSGYHDNHQVI 1332

  Fly  2800 KWFWSIVEKMNIMERQDLVYFWTGSPALPASEEGFQPLPSVT-------IRPADDSHLPTANTCI 2857
            .|||.::|:.:..:|..|:.|.||:.::|  .|||..|...|       .:....:.||.|:||.
  Fly  1333 VWFWQVIERFSNEQRLRLLQFVTGTSSIP--YEGFSALRGSTGPRRFCIEKWGKPNALPRAHTCF 1395

  Fly  2858 SRLYIPLYSSKSILRSKMLMAIKSKN-FG 2885
            :||.:|.|.:..:|..|:|:|::..| ||
  Fly  1396 NRLDLPPYPTPELLYEKLLLAVEETNTFG 1424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562 35/190 (18%)
PolyA 2498..2561 CDD:197769 13/68 (19%)
HECTc 2589..2885 CDD:238033 84/337 (25%)
HECTc 2589..2884 CDD:214523 84/336 (25%)
CG42797NP_572574.2 WW 638..667 CDD:278809 0/28 (0%)
HECTc 1068..1424 CDD:238033 86/374 (23%)
HECTc 1092..1423 CDD:214523 86/349 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447003
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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