Sequence 1: | NP_001287262.1 | Gene: | hyd / 41181 | FlyBaseID: | FBgn0002431 | Length: | 2887 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006239262.1 | Gene: | Ubr4 / 313658 | RGDID: | 1563121 | Length: | 5233 | Species: | Rattus norvegicus |
Alignment Length: | 3770 | Identity: | 678/3770 - (17%) |
---|---|---|---|
Similarity: | 1115/3770 - (29%) | Gaps: | 1466/3770 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LQPLPGSD---------DQFIERIREVSDKV--NRF---------------GYGSHRI-----FE 41
Fly 42 QLKIPVKEVVIGPAHI-------------GV-------LLEDGKAFRVSFSINSEKLDLTKSDA- 85
Fly 86 ----KC-----------STS---GG------------------------SGTASASKAPSSSRPM 108
Fly 109 ARSRAR-LLRATGR---SNSTGQGSGSRSTGVIIGGSTSSRPLVTVPATYVPEELISQAEVVLQG 169
Fly 170 KSRNLIIRELQRTNLDVNLAVNNLLSRDDEEAEDTEEGADNYVPEDLISLLDNGFSGDNNSVIID 234
Fly 235 --PSDGLFSEEIFSNYSSIRNLLFDRIRSERSNANANAADSNQSTTRSTSSGTALTGNSGLSAQI 297
Fly 298 SVNADREAFSRWRDRQYYGPRRWISKDDYTWEKDADSKKKEPSPMLSPIWISEELQPWPEK---- 358
Fly 359 ---------SSVRFKTIGALYSEFIALSESGDLYQWRWSDAEPYKSETENVYHPKTVSLNIVERV 414
Fly 415 ELISA-NFIR--CSVVTETNRVATWMD-----EQLGYIGAKLEHSCCAFNEFISDSITKIYVCSL 471
Fly 472 YTVVKTESNN-----IYWWGVLPFDQ---------------RRFL-------------------- 496
Fly 497 -WDKFRTKTK--------------------------------KPFKVVAT-------DINVGAQV 521
Fly 522 IMKKCPMYQSGSIGFTCSNGVPKVGQLL------------NSVWTFTDVCRMKIIN--INTNSGV 572
Fly 573 DKSQAAGNNLNA---HGI----------------------------TPDKDLPK----------- 595
Fly 596 -----------STAMPSTGSSKNGQSFSNSKESTD--------------RI--DMPPPP------ 627
Fly 628 ---SPASSTCS--DTGSVTSHKRTKRATTKEDSNAPQEGRKDE------ELWEVK------DVVF 675
Fly 676 VEDKVG-PVGKVLKVDGDFVAV--RFPAINAAAVAAAAAATSSTSNTASTSKEEGKEDDWQQCRL 737
Fly 738 LRR---EDVQIFRTAMSTRGPDWLQ--------KQPKKINVGGDAAGAQILTLAVDSRGIHVIKK 791
Fly 792 VLGKIHYSLYNLYNCKQEQNCLFPTDCNSFIGSTPGNILMACNDDCSGNSSTIVLRDGNGALYPL 856
Fly 857 AKDCLGSIKDPQWFDLPPVKSITMSTI---SLP-------AMLSGVNLKSKVCMTALLFD----T 907
Fly 908 QKLMPHILRCDVKNSF-AALGRLER-----EDQADTALVVEERCDGARNIF--HACVIMCAPSSN 964
Fly 965 KD-SPPDSPSGGVEKK------------------SLVGLSVARSIPTVSTSAYVSSIAFGASASS 1010
Fly 1011 SNENSSFATMSSSAAGSASSTSRDNRTNLRDMMNRLI-----NSDQAE----------------- 1053
Fly 1054 QSGSQ--------------PMATN---NEDHAYIPWPAETPAASNLSASSSQ-----NVSDSIED 1096
Fly 1097 DISKIIPSSSQSSMLSNIKLGSPTYTFDLAQRREHALTILQQMCVSPALRPYLCHMLS------- 1154
Fly 1155 -TKDAQGQTPFMLSVSC--RAYEAGIILLNTILMLSEQDPQLKEAMIFPNGSPADQSPLHVICYN 1216
Fly 1217 DTCSFTWTGADHINQNIFECKTCGLTGSLCCCTECARVCHKGHDCKLKRTAPTAYCDCWEKCKCK 1281
Fly 1282 ALIAGNLTKRFALLCKLVSCTDLVTKFNSKGESILLFLIQTVGRQIVEQRQYRFSVR-VRNVSTA 1345
Fly 1346 ATGATGNNSVISNRKTSAAEIDNDMPDHDLEPPK----------------------FARKALERL 1388
Fly 1389 LIDWNAVRSMIMSGAERGDVPNPAGSASENSNSEGFNMFIQTQHGSTLLDKFTHSLIVKCTSDHL 1453
Fly 1454 DTLLLTLVRELQNASVS---NRSKEAEEVVRRFV-----RSVA---------------------- 1488
Fly 1489 -RVFVIFNLEKQPNPEKRK------------------SHSSCNK-YVQSCVKVFQTLHKISIEEL 1533
Fly 1534 CEVSEALIAPVRLGVVRPTAPFTM-------SSSNLDVRNSD-----DLFSVDPLAPS-NVESPS 1585
Fly 1586 EQILVHDAGNDQSANFNIQQNYDVVAMETIRDASESEEVINREANSHNQDDELIEN--QRNEDGM 1648
Fly 1649 QDDESDNDFTFNDAETESDSDDNQSNQEVQRSVQAGATVGSENDIGVLFLEDESGDSSAQEEDGS 1713
Fly 1714 EDGESDDQSDEFNFNEQQLERRST------------NSNARSDLAPQTMQWA-IRSRDTARSSVR 1765
Fly 1766 VPTGSNMVFI---DPMALRR-STVPASTTV----------------TT----------------- 1793
Fly 1794 --------PSIEPHTMAT---------TASNLARAFGITIRQISELISILSYN-VLNDIE----- 1835
Fly 1836 ----------------------------TSLKIQNDEA----------IAVQA------FVE--- 1853
Fly 1854 -----KRLKATW-DWMFTVMDGTEAQLKFGAYLTNYTDP-------------------NHPLHP- 1892
Fly 1893 ---------------LNLSAQASSSQTPAPATSSSVNGVNIMGSNSRRDFFTYCLSLMRSHTSEH 1942
Fly 1943 RDAL-------PVLDITALRHIAYVLDAFV--------------------------YYMRNDSGF 1974
Fly 1975 YDKQ----DTIS-----------------------GRINNLSPMTES----YDTDDELANLEEFN 2008
Fly 2009 ADV----------QMSASSMPSGSQGTR-------------------------RHAFFARS---- 2034
Fly 2035 ----ESTLSLGCSAPEGF---EL-------PLDMAMPLADKP-----------HLLQPNSKRQEL 2074
Fly 2075 FANLPLLVTTNANNSGATNDG--------------DGGSIFDYTPTRLGFSNSLKRNERVYETVP 2125
Fly 2126 IDSSKTGDGNVTN-----------KAEG---------STDSNIYVQL-------KKKQGSDDFKS 2163
Fly 2164 HKEADG------NQSKYEKVVLMETDDSLP------STSKSTEALMATRPEVIIAPNKASVSPAT 2216
Fly 2217 AARSVIVLAGGSCLKTIDSDINNYSASNLSTAEQAKCDTQYQKSTSD-HLLLFPARGSQFYQSNF 2280
Fly 2281 SELPSWNFLLSRWKLTLDLFGRVFMDDVGMEHGSVLPELRGFPVKEMRFRRHMEKLRNGQQRDLV 2345
Fly 2346 LCKLERNRESLIVQTFKELNTQFGNQSRRIQPPITFNRVKVTFKDEPGEGSGVARSFYTSIAEAL 2410
Fly 2411 LASAKIPNLESVQVGTNHSK--------YVVPFSSILRSRTVSGSSR---DQSTLQRRGSNSKIL 2464
Fly 2465 ------------------WR---SARERKALNLDARPYT---PPNSSDNATPESLNDHLSVHLQQ 2505
Fly 2506 IGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEIITFKQKSETSAQS 2570
Fly 2571 SQPKKSPSVVVVDPVDDDNEPLFYSPGKRGFYTP---RQG-------FASFERINAFRNI----G 2621
Fly 2622 RLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHDLAFFDPALYESFRQIIQNAQTKEGEETINRM 2686
Fly 2687 ELC----------FVIDLMKEEG-------------CGNREL-----------IPGGRDVAVTSS 2717
Fly 2718 NIFEYVRRYTEYRLIKSQEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVGDINVSTLISYT 2782
Fly 2783 TFNDESSEGPDKLLKFKKWF----------WS-------IVEKMNIMERQDLV-YFWTGSPALPA 2829
Fly 2830 2829 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hyd | NP_001287262.1 | E3_UbLigase_EDD | 150..196 | CDD:288409 | 4/45 (9%) |
ZnF_UBR1 | 1217..1284 | CDD:197698 | 22/66 (33%) | ||
ASF1_hist_chap | 1535..1733 | CDD:304562 | 42/212 (20%) | ||
PolyA | 2498..2561 | CDD:197769 | 6/62 (10%) | ||
HECTc | 2589..2885 | CDD:238033 | 55/307 (18%) | ||
HECTc | 2589..2884 | CDD:214523 | 55/307 (18%) | ||
Ubr4 | XP_006239262.1 | ZnF_UBR1 | 1661..1728 | CDD:197698 | 24/86 (28%) |
DZR | 3698..3742 | CDD:289539 | |||
E3_UbLigase_R4 | 4405..5213 | CDD:290481 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D717at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |