DRSC/TRiP Functional Genomics Resources

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Protein Alignment hyd and Bag3

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_001011936.1 Gene:Bag3 / 293524 RGDID:1307794 Length:574 Species:Rattus norvegicus


Alignment Length:140 Identity:39/140 - (27%)
Similarity:57/140 - (40%) Gaps:46/140 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1017 FATMSSSAAGSASSTSRDNRTNLRDMMNRLINSDQAEQSGSQP-MATNNEDHAYIPWPAETPAAS 1080
            |.|.:::||...|      ::.||..:.....:|  :|.|..| .||.....|:.|..:::||||
  Rat   124 FRTEAAAAAPQRS------QSPLRGGVTETTQTD--KQCGQVPAAATAQPPTAHGPERSQSPAAS 180

  Fly  1081 NLSASSSQNVSDSIEDDISKIIPSSSQSSMLSNIKLGSPTYTFDLAQRREHAL--------TILQ 1137
            :.|:|||           |..:|||.:||      |||            |.|        .|.:
  Rat   181 DCSSSSS-----------SASLPSSGRSS------LGS------------HQLPRGYIPIPVIHE 216

  Fly  1138 QMCVSPALRP 1147
            |....||.:|
  Rat   217 QNITRPAAQP 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562
PolyA 2498..2561 CDD:197769
HECTc 2589..2885 CDD:238033
HECTc 2589..2884 CDD:214523
Bag3NP_001011936.1 WW 23..55 CDD:197736
BAG 423..500 CDD:214591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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