DRSC/TRiP Functional Genomics Resources

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Protein Alignment trbd and VCPIP1

DIOPT Version :10

Sequence 1:NP_649931.1 Gene:trbd / 41179 FlyBaseID:FBgn0037734 Length:778 Species:Drosophila melanogaster
Sequence 2:NP_079330.2 Gene:VCPIP1 / 80124 HGNCID:30897 Length:1222 Species:Homo sapiens


Alignment Length:263 Identity:57/263 - (21%)
Similarity:103/263 - (39%) Gaps:67/263 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 GDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTRWKEYEMLQASMLHFTLEDSQFEEDW 580
            |.||:.:..:|..|    ..:...||.:.|.|.......|::       ::.|..::.:::|:..
Human   217 GHCLVHAVSRALVG----RELFWHALRENLKQHFQQHLARYQ-------ALFHDFIDAAEWEDII 270

  Fly   581 STLLSLAGQPGS---SLEQLHIFALAHILRRPIIVYGVKYVKSFRGEDIGYARFEGVYLPLFWDQ 642
            :....|...|..   .|..:|||.||::|.||||:.          :.:...|..|.|...|   
Human   271 NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILL----------DSLSGMRSSGDYSATF--- 322

  Fly   643 NFCTKSPIALGYTRGHFSALVPMEPFTRIDGRRDDVEDVT--------YLPLMDCE---LKLLPI 696
                            ...|:|.|..|..||..:....:.        |:||:..:   |..||:
Human   323 ----------------LPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPM 371

  Fly   697 HFLTQSEVGNEESMMRQWLDVCVTDGGLLVA-----QQKLSKRPLLVAQMLEEWLN----HYRRI 752
            :.|.:: .|..:.::::::.: ..|||.::.     |.|...|  |||.|.|.:::    |...:
Human   372 NLLPKA-WGVPQDLIKKYIKL-EEDGGCVIGGDRSLQDKYLLR--LVAAMEEVFMDKHGIHPSLV 432

  Fly   753 AQV 755
            |.|
Human   433 ADV 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trbdNP_649931.1 zf-RanBP 11..36 CDD:395516
RanBP2-type Zn finger 11..30 CDD:275376
ZnF_RBZ 91..114 CDD:197784
RanBP2-type Zn finger 93..112 CDD:275376
RanBP2-type Zn finger 175..192 CDD:275375
ZnF_RBZ 234..256 CDD:197784
RanBP2-type Zn finger 236..255 CDD:275376
AnkUBD 336..409 CDD:408216
OTU_ZRANB1 480..664 CDD:438604 30/150 (20%)
VCPIP1NP_079330.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
VCIP135_N 38..202 CDD:437269
OTU_VCIP135 164..360 CDD:438606 38/182 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..776
Ubl_OTU1 775..849 CDD:340579
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1074
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1113..1175
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1188..1222
Blue background indicates that the domain is not in the aligned region.

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