DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unc-115b and dmtn

DIOPT Version :10

Sequence 1:NP_731390.1 Gene:Unc-115b / 41178 FlyBaseID:FBgn0260463 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001188338.1 Gene:dmtn / 565367 ZFINID:ZDB-GENE-030131-9438 Length:397 Species:Danio rerio


Alignment Length:412 Identity:97/412 - (23%)
Similarity:140/412 - (33%) Gaps:138/412 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 RCGPGPSESGIILNGGGGTSSVVGGASNGNFTDTECDRMSSSALSEMYIRS-------------- 371
            :.|..||..|....|...||.|.              ||.:..:....:.:              
Zfish     3 KAGTAPSSRGPSAPGSPATSIVA--------------RMDNQVIGYKDLAAIPKDKAILEVERPD 53

  Fly   372 ---RTPSFNGSLYSS---SRKHYRTVSPGLI----------------LREYGRPNAEDISRIYTY 414
               ..|.||.:....   ||...|::||..|                ..|.|.|...::.     
Zfish    54 LMVYEPHFNMAALDHVGLSRSRERSMSPHSISPPPSPEISASKELKDWSEQGSPGGSNMG----- 113

  Fly   415 SYLTDAPHYLRKPIDPYDKTPLSPHFHRPSSYATTASNAGSVAGSRPPSRPHSRTRSAMKVLVDA 479
                 :...||| |.|..|.|:. |||||.|..............|....|||:.        |.
Zfish   114 -----STTQLRK-ISPASKGPMQ-HFHRPDSGINLYKKPPIYKNERQTGAPHSKQ--------DL 163

  Fly   480 IRSETPRPKSPGMNNEEPIELSHYPAAKKPPPGEQPKIERDDFPAPPYPYT-DPERRRRYSDTYK 543
            |                 |..|.:|||:.|.|....|||.:.:|.||...| :.|.||:.::  :
Zfish   164 I-----------------IVSSKFPAAQPPDPSLPSKIETEYWPCPPSLATMEIEWRRKAAE--Q 209

  Fly   544 GVPASDDEDENVENGKPNGKVKNGEEQQRLQREAEQLEKLNSGIGSAIAKDLKEHAKYRKWKQNN 608
            |.|..||:.|::.           |:.:|||.  ::|:|:.|.:|..|.|:..|.:...:.|..:
Zfish   210 GKPMEDDDFEDLT-----------EDAKRLQE--QELQKIQSNLGKLILKEEIEKSGLIRRKTRS 261

  Fly   609 L-DPRN------ASRTPSASKEPLYK---LRYES---------------PIGASPSRNLDH---- 644
            | |..|      ||.|.|||..|..:   .|.:|               |.|.|.|..:|.    
Zfish   262 LPDGTNIHLGSSASTTKSASLPPCSRTGLTRLQSADFSSTDNGKAKTGVPNGDSQSGRMDRGNSL 326

  Fly   645 ----QKPFYEDEMFDRSTSYRG 662
                ::..|..||.  ..::||
Zfish   327 PSILEQKIYPYEML--IVTHRG 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-115bNP_731390.1 LIM1_abLIM 46..97 CDD:188713
LIM2_abLIM 102..157 CDD:188714
LIM3_abLIM 211..262 CDD:188715
LIM4_abLIM 270..326 CDD:188716 1/4 (25%)
dmtnNP_001188338.1 AbLIM_anchor 5..347 CDD:465046 97/410 (24%)
VHP 362..397 CDD:460493
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.