DRSC/TRiP Functional Genomics Resources

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Protein Alignment Unc-115b and ABLIM1

DIOPT Version :9

Sequence 1:NP_731390.1 Gene:Unc-115b / 41178 FlyBaseID:FBgn0260463 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_006717900.1 Gene:ABLIM1 / 3983 HGNCID:78 Length:788 Species:Homo sapiens


Alignment Length:909 Identity:274/909 - (30%)
Similarity:356/909 - (39%) Gaps:360/909 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HPQTDKTRPIYPSTLGTELRTELGKTGQGKQKIYCAKCTKKCSGEVLRVADNHFHKACFQCCQCK 76
            |||.    |.:||.               |..|:|.||.:.|.||||||...|||..||.|..|.
Human    24 HPQD----PHHPSE---------------KPVIHCHKCGEPCKGEVLRVQTKHFHIKCFTCKVCG 69

  Fly    77 KSLATGGFFTKDNAYYCIPDYQRLYGTKCANCQQYVEGEVVSTMGKTYHQKCFTCSKCKQPFKSG 141
            ..||.||||.|:..|.|..||||:|||:|..|.::||||||:.:|||||..||.|:.||:||..|
Human    70 CDLAQGGFFIKNGEYLCTLDYQRMYGTRCHGCGEFVEGEVVTALGKTYHPNCFACTICKRPFPPG 134

  Fly   142 SKVTNTGKEVLCEQCVTGAPVSPSRQATGGGVSSPAPPAESPTRATAHQQHGSVISHKAHLKEDY 206
            .:||..|::.||:.|  ..|:|          |||                          ||..
Human   135 DRVTFNGRDCLCQLC--AQPMS----------SSP--------------------------KETT 161

  Fly   207 DPNDCAGCGELLKEGQALVALDRQWHVSCFRCKACQAVLNGEYMGKDAVPYCEKCYQKGFGVKCA 271
            ..::|||||..:|.||||:|||:|||:.||:||:|..||.|||:.||..|||||.||..|||||.
Human   162 FSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQGLFGVKCE 226

  Fly   272 YCSRFISGKVLQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQGSAIWHPRC-------------- 322
            .|.:||:||||:|||. |:||:||||::|...|.:|||||||||.:|||.|              
Human   227 ACHQFITGKVLEAGDK-HYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDCKQSTKTEEKLRLPN 290

  Fly   323 ------------------GPGPS------ESGIILNGGGGTSSVVGGASNGN------------- 350
                              |..||      .|..|.:..|  ||:.|  |.|:             
Human   291 IRRSSSDFFYSKSLIRRTGRSPSLQPTRTSSESIYSRPG--SSIPG--SPGHTIYAKVDNEILDY 351

  Fly   351 --------------------------FTDTECDRMSSSALSEM-YIRSRTPSFNGSLYSSSRKHY 388
                                      :|....|:....:|.|. ...|.|||..|......|..:
Human   352 KDLAAIPKVKAIYDIERPDLITYEPFYTSGYDDKQERQSLGESPRTLSPTPSAEGYQDVRDRMIH 416

  Fly   389 RTVSPGLILREYGRPNAEDISRIYTYSYLTDAPHYLRKPIDPYDKTPLSP-HFHRPS-------- 444
            |:.|.|.|                      ::|.|.|....|  .|..|| |||||.        
Human   417 RSTSQGSI----------------------NSPVYSRHSYTP--TTSRSPQHFHRPELLSPGVQR 457

  Fly   445 -SYATTASNAGSVAGSR--PPSRPHSRTRSAMKVLVDAIRSETP--------------RPKSP-- 490
             ||..|:|.:.:.:.||  ||.|.|         .:..|:...|              ||.:|  
Human   458 LSYLRTSSLSPTHSDSRPNPPFRHH---------FIPHIKGNEPSSGRNSPLPYRPDSRPLTPTY 513

  Fly   491 ------------GMN----------------------NEEPIELSHYPAAKKPPPGEQPKIERDD 521
                        |:|                      :|:.|:.|.:|||:.|.|.|.||||.|.
Human   514 AQAPKHFHVPDQGINIYRKPPIYKQHDAAALAAQSKSSEDIIKFSKFPAAQAPDPSETPKIETDH 578

  Fly   522 FPAPP-YPYTDPERRRRYSDTYKGVPASDDEDENVENGKPNGKVKNGEEQQRLQREAEQLEKLNS 585
            :|.|| :....|:.:||.|       ..:::||              |..:|.|.:.|||.||||
Human   579 WPGPPSFAVVGPDMKRRSS-------GREEDDE--------------ELLRRRQLQEEQLMKLNS 622

  Fly   586 GIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPIGASPSRNLDHQKPFYE 650
            |:|..|.|:..|                   ..|..:..|...||:|||                
Human   623 GLGQLILKEEME-------------------KESRERSSLLASRYDSPI---------------- 652

  Fly   651 DEMFDRSTSYRGSLGKSLGNAPSYNAIHSYRSPPKPGYGFKTTTLPYIRNGF----SSDFS-YGG 710
                               |:.|:  |.|.::...||||         |||.    |:||: |..
Human   653 -------------------NSASH--IPSSKTASLPGYG---------RNGLHRPVSTDFAQYNS 687

  Fly   711 LGDKTHSTDLSCGKSEASVDSITEG--DRRALMGGDLPASSTYSGALSYHYPQAGLIRRSLPNM 772
            .||                  ::.|  |.:.|..|.:||.....|.             |:|||
Human   688 YGD------------------VSGGVRDYQTLPDGHMPAMRMDRGV-------------SMPNM 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-115bNP_731390.1 LIM1_abLIM 46..97 CDD:188713 26/50 (52%)
LIM2_abLIM 102..157 CDD:188714 28/54 (52%)
LIM3_abLIM 211..262 CDD:188715 33/50 (66%)
LIM4_abLIM 270..326 CDD:188716 34/87 (39%)
ABLIM1XP_006717900.1 LIM1_abLIM 39..90 CDD:188713 26/50 (52%)
LIM2_abLIM 95..150 CDD:188714 29/56 (52%)
LIM3_abLIM 166..217 CDD:188715 33/50 (66%)
LIM4_abLIM 225..280 CDD:188716 33/55 (60%)
AbLIM_anchor 318..752 CDD:292800 124/557 (22%)
VHP 753..788 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160038
Domainoid 1 1.000 89 1.000 Domainoid score I7842
eggNOG 1 0.900 - - E1_KOG1044
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 384 1.000 Inparanoid score I2046
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001360
OrthoInspector 1 1.000 - - mtm8549
orthoMCL 1 0.900 - - OOG6_103132
Panther 1 1.100 - - O PTHR24213
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X852
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.790

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