DRSC/TRiP Functional Genomics Resources

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Protein Alignment Unc-115b and Ablim1

DIOPT Version :9

Sequence 1:NP_731390.1 Gene:Unc-115b / 41178 FlyBaseID:FBgn0260463 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_848803.3 Gene:Ablim1 / 226251 MGIID:1194500 Length:861 Species:Mus musculus


Alignment Length:927 Identity:269/927 - (29%)
Similarity:352/927 - (37%) Gaps:376/927 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ISIPKHPQTDKTRPIYPSTLGTELRTELGKTGQGKQKIYCAKCTKKCSGEVLRVADNHFHKACFQ 71
            ::.|:.|.....:|:                      |:|.||.:.|.||||||...|||..||.
Mouse    82 VAHPQDPHHSSEKPV----------------------IHCHKCGEPCKGEVLRVQTKHFHIKCFT 124

  Fly    72 CCQCKKSLATGGFFTKDNAYYCIPDYQRLYGTKCANCQQYVEGEVVSTMGKTYHQKCFTCSKCKQ 136
            |..|...||.||||.|:..|.|..||||:|||:|..|.::||||||:.:|||||..||.|:.||:
Mouse   125 CKVCGCDLAQGGFFIKNGDYLCTLDYQRMYGTRCHGCGEFVEGEVVTALGKTYHPNCFACTICKR 189

  Fly   137 PFKSGSKVTNTGKEVLCEQCVTGAPVSPSRQATGGGVSSPAPPAESPTRATAHQQHGSVISHKAH 201
            ||..|.:||..|::.||:.|.                   .|.:.||..|:.             
Mouse   190 PFPPGDRVTFNGRDCLCQLCA-------------------QPMSSSPKEASC------------- 222

  Fly   202 LKEDYDPNDCAGCGELLKEGQALVALDRQWHVSCFRCKACQAVLNGEYMGKDAVPYCEKCYQKGF 266
                  .::|||||..:|.||||:|||:|||:.||:||:|..||.|||:.||..|||||.||..|
Mouse   223 ------SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGSPYCEKDYQGLF 281

  Fly   267 GVKCAYCSRFISGKVLQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQGSAIWHPRC--------- 322
            ||||..|.:||:||||:|||. |:||:||||::|...|.:|||||||||.:|||.|         
Mouse   282 GVKCEACHQFITGKVLEAGDK-HYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDCKQSTKTEEK 345

  Fly   323 -----------------------GPGP-----------------------SESGIILNGGGGTSS 341
                                   |..|                       |...|....|   ||
Mouse   346 LRPPNIPRSSSDFFYPKSLIRRTGRSPALQLLSPPCLMNSNKNPRQPTRTSSESIYSRPG---SS 407

  Fly   342 VVGGASNGNF--TDTEC-----------------------------------DRMSSSALSEM-Y 368
            :.|...:..:  .|.|.                                   |:....:|.|. .
Mouse   408 IPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFYTSGYEDKQERQSLGESPR 472

  Fly   369 IRSRTPSFNGSLYSSSRKHYRTVSPGLILREYGRPNAEDISRIYTYSYLTDAPHYLRKPIDPYDK 433
            ..|.|||..|......|..:|:.|.|.|                      ::|.|.|....|  .
Mouse   473 TLSPTPSAEGYQDVRDRMIHRSTSQGSI----------------------NSPVYSRHSYTP--T 513

  Fly   434 TPLSP-HFHRP---------------SSYATTASNAGSVAGSRPPSR-----------PHSRTRS 471
            |..|| |||||               ||:::|.|:    :...||.|           |.|...|
Mouse   514 TSRSPQHFHRPELLSPGVHRWSPLRTSSFSSTHSD----SRPNPPFRHHFLPHVKGNEPSSGRNS 574

  Fly   472 AMKVLVDAIRSETP----RPK-----SPGMN--------------------NEEPIELSHYPAAK 507
            .:....|: |..||    .||     ..|:|                    :|:.|:.|.:|||:
Mouse   575 PLPYRPDS-RPLTPTYAQAPKHFHVPDQGINIYRKPPIYKQHAALAAQSKASEDIIKFSKFPAAQ 638

  Fly   508 KPPPGEQPKIERDDFPAPP---YPYTDPERRRRYSDTYKGVPASDDEDENVENGKPNGKVKNGEE 569
            .|.|.|.||||.|.:|.||   ...|||.||          .:..:|||.             |.
Mouse   639 APDPNEIPKIETDHWPGPPSLAAVGTDPRRR----------SSGREEDEE-------------EL 680

  Fly   570 QQRLQREAEQLEKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEPLYKLRYESPI 634
            .:|.|.:.|||.|||||:|..|.|:             .::..:..|...||       ||:||:
Mouse   681 LRRRQLQEEQLMKLNSGLGQLILKE-------------EMEKESRERASLAS-------RYDSPL 725

  Fly   635 GASPSRNLDHQKPFYEDEMFDRSTSYRGSLGKSLGNAPSYNAIHSYRSPPKPGYGFKTTTLP-YI 698
                                           .|..:|||                .||::|| |.
Mouse   726 -------------------------------HSASHAPS----------------SKTSSLPGYG 743

  Fly   699 RNGF----SSDF----SYGGLGDKTHSTDLSCGKSEASVDSITEGDRRALMGGDLPASSTYSGAL 755
            :||.    |:||    |||         |:|.|..          |.:.|..|.:||.....|. 
Mouse   744 KNGLHRPVSTDFAQYNSYG---------DISGGVR----------DYQTLPDGHMPAVRMDRGV- 788

  Fly   756 SYHYPQAGLIRRSLPNM 772
                        |:|||
Mouse   789 ------------SMPNM 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-115bNP_731390.1 LIM1_abLIM 46..97 CDD:188713 26/50 (52%)
LIM2_abLIM 102..157 CDD:188714 28/54 (52%)
LIM3_abLIM 211..262 CDD:188715 33/50 (66%)
LIM4_abLIM 270..326 CDD:188716 34/87 (39%)
Ablim1NP_848803.3 LIM1_abLIM 99..150 CDD:188713 26/50 (52%)
LIM2_abLIM 155..210 CDD:188714 28/54 (52%)
LIM3_abLIM 226..277 CDD:188715 33/50 (66%)
LIM4_abLIM 285..340 CDD:188716 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..414 6/42 (14%)
AbLIM_anchor 394..825 CDD:292800 127/554 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..590 39/159 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 634..682 23/70 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 713..748 18/88 (20%)
VHP 826..861 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850409
Domainoid 1 1.000 87 1.000 Domainoid score I7971
eggNOG 1 0.900 - - E1_KOG1044
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 394 1.000 Inparanoid score I1956
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001360
OrthoInspector 1 1.000 - - mtm8778
orthoMCL 1 0.900 - - OOG6_103132
Panther 1 1.100 - - O PTHR24213
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X852
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.750

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