DRSC/TRiP Functional Genomics Resources

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Protein Alignment Unc-115b and unc-115

DIOPT Version :9

Sequence 1:NP_731390.1 Gene:Unc-115b / 41178 FlyBaseID:FBgn0260463 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001024542.1 Gene:unc-115 / 181227 WormBaseID:WBGene00006839 Length:639 Species:Caenorhabditis elegans


Alignment Length:744 Identity:244/744 - (32%)
Similarity:324/744 - (43%) Gaps:195/744 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GKQKIYCAKCTKKCSGEVLRVADNHFHKACFQCCQCKKSLATGGFF-TKDNAYYCIPDYQRLYGT 103
            ||:   |..|.|||||:||:..|.:||..||||.:|.::|...||: |.:|||.|..|::.    
 Worm    16 GKK---CDVCRKKCSGDVLKANDKYFHINCFQCKKCGRNLGETGFYTTPENAYLCPDDFRA---- 73

  Fly   104 KCANCQQYVEGEV-VSTMGKTYHQKCFTCSKCKQPFKSGSKVTNTGKEVLCEQCVTGAPVSPSRQ 167
                    |..|: |.|..:..|....:.:..|.|.||..              .|....|.:..
 Worm    74 --------VSKEITVKTTTQQAHASSSSAATPKSPEKSNG--------------TTDVSSSGAAN 116

  Fly   168 ATGGGVSSPAPPAESPTRATAHQQHGSVISHKAHLKEDYDPNDCAGCGELLKEGQALVALDRQWH 232
            ||...:|    |..|||                         .||.|.:.|..||.|:||...||
 Worm   117 ATLQQIS----PLGSPT-------------------------TCAACDQALHSGQVLLALGLSWH 152

  Fly   233 VSCFRCKACQAVLNGEYMGKDAVPYCEKCYQKGFGVKCAYCSRFISGKVLQAGDNHHFHPTCARC 297
            |.||:|..|.|||:||||.....|.|.:.|.:.|||||..|.:||:||||||| .:.||||||||
 Worm   153 VYCFKCSECSAVLHGEYMSHHGKPLCLRDYNEKFGVKCYECEKFIAGKVLQAG-GYKFHPTCARC 216

  Fly   298 TKCGDPFGDGEEMYLQGSAIWHPRCGPGPSESGIILNGGGGTSSVVGGASNGNFTDTECDRMSSS 362
            ::||..||||||||:||..||||.|....:...|...|                           
 Worm   217 SRCGSHFGDGEEMYMQGDEIWHPSCEHARTTENIAPTG--------------------------- 254

  Fly   363 ALSEMYIRSRTPSFNGSLYSSSRKHYRTVSPGLILREYGRPNAEDISRIYTYSYLTDAPH--YLR 425
                   |:.|.|.|...|.|:               :|:..|        |.||.....  |||
 Worm   255 -------RAATLSRNEPKYQST---------------FGQHQA--------YMYLLPEVEQTYLR 289

  Fly   426 KPIDPYDKTPLSPHFHRPSSYATTASNAGSVAGSRPPSRPHSRTRSAMKVLVDAIRSETPRPKSP 490
            .|: ...|.|.:|.:|.|....       .:..||     .|..::.|:.|.:.:....||||||
 Worm   290 HPV-MNAKEPNAPQYHVPQGPI-------KIRKSR-----MSMLKTGMQRLTEDLEKNIPRPKSP 341

  Fly   491 GMNNEEPIELSHYPAAKKPPPGEQPKIERDDFPAPPYPYTDPERRRRYSDTYKGVPASDDEDENV 555
            .|:|||||||:|||||..|.|...|.|||:|||||.:||...|.:||.|.:......||||... 
 Worm   342 HMDNEEPIELAHYPAAHVPDPDTLPAIEREDFPAPQFPYAVEELKRRLSTSSVENEISDDEYSE- 405

  Fly   556 ENGKPNGKVKNGEEQQRLQREAEQLEKLN-SGIGSAIAKDLKE-HAKYR---KWKQNNLDPRNAS 615
                 :.||    ::.:|::..|.|||.| |.|...|.::::: |.|.|   .|     ||||||
 Worm   406 -----SDKV----DEDKLRKTVETLEKYNDSSIAHVIRQNIEDSHKKQRLPLHW-----DPRNAS 456

  Fly   616 RTPSASKEPLYKLRYESPIGASPSRNLDHQKPFYEDEMFDRSTSYRGSLGKSLGNAPSYNAIHSY 680
            ||||..|.|..|.||:.||.|||||:|:..:|:         ..::|. .:..||    |.:..:
 Worm   457 RTPSGKKMPHLKFRYDVPINASPSRHLNRPRPW---------VVWQGG-ERDQGN----NTLPCF 507

  Fly   681 RSP-PKPGYGFKTTTLPYIRNGFSSDFSYGGLGDKTHSTDLSCGKSEASVDSITEGDRRALMGGD 744
            ..| .......:..|||   ..|..:.|...| |.|.|:..|   ..::.:|.|.|..|:..|  
 Worm   508 HIPEDSRANTLRAATLP---TEFGQNLSLENL-DTTISSHYS---EHSTTESGTAGGPRSAGG-- 563

  Fly   745 LPASSTYSGALSYHYPQAGLIRRSLPNMS 773
                              .::|.|||:||
 Worm   564 ------------------AVLRSSLPDMS 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-115bNP_731390.1 LIM1_abLIM 46..97 CDD:188713 25/51 (49%)
LIM2_abLIM 102..157 CDD:188714 9/55 (16%)
LIM3_abLIM 211..262 CDD:188715 25/50 (50%)
LIM4_abLIM 270..326 CDD:188716 36/55 (65%)
unc-115NP_001024542.1 LIM1_abLIM 19..71 CDD:188713 25/51 (49%)
LIM3_abLIM 131..182 CDD:188715 25/50 (50%)
LIM4_abLIM 190..245 CDD:188716 36/55 (65%)
Myc_N <350..480 CDD:279405 62/144 (43%)
VHP 604..639 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 155 1.000 Domainoid score I2585
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I1300
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29199
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001360
OrthoInspector 1 1.000 - - otm14748
orthoMCL 1 0.900 - - OOG6_103132
Panther 1 1.100 - - O PTHR24213
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X852
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.970

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