DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Unc-115b and Dmtn

DIOPT Version :10

Sequence 1:NP_731390.1 Gene:Unc-115b / 41178 FlyBaseID:FBgn0260463 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_036014334.1 Gene:Dmtn / 13829 MGIID:99670 Length:424 Species:Mus musculus


Alignment Length:385 Identity:88/385 - (22%)
Similarity:134/385 - (34%) Gaps:128/385 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 RPNAEDISRIYTYSYL--TDAPHYLRKPIDPYDKT-PLSPHFHRPS------SYATTASNAGSVA 457
            ||:.......:|||.|  .:.|......:.|...: |.||.....|      |.|:|....|:..
Mouse    58 RPDLMIYEPHFTYSLLEHVELPRSRECSLSPKSTSPPPSPEVWAESRTLGIISQASTPRTTGTPR 122

  Fly   458 GSRP----PSRPHSRTRSAMKVLVDAIRSETPRP------KSPGMNNEEP--------------- 497
            .|.|    |..|...:....::::..: |||.||      |.|.....|.               
Mouse   123 TSLPHFHHPEPPPLSSCPLSQLILFCL-SETTRPDSNIYKKPPIYKQRESVGGSPQSKHLIEDLI 186

  Fly   498 IELSHYPAAKKPPPGEQPKIERDDFPAPP-YPYTDPERRRRYSDTYKGVPASDDEDENVENGKPN 561
            ||.|.:|||:.|.|.:..|||.|.:|.|| ....:.|.|:|.: :.||....::|:::       
Mouse   187 IESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKA-SRKGAEEEEEEEDD------- 243

  Fly   562 GKVKNGEEQQRL--QREAEQLEKLNSGIGSAIAKDLKEHAKYRKWKQNNLDPRNASRTPSASKEP 624
                :.||:.:.  :|:.|:|.|:.|.:|..|.|:..|.:                 .|...|  
Mouse   244 ----DSEEEIKAIRERQKEELSKVTSNLGKMILKEEMEKS-----------------LPIRRK-- 285

  Fly   625 LYKLRYESPIGASPSRNLDHQKPFYEDEMFDRSTSYRGSLGKSLGNAPSYNAIHSYRSPPKPGYG 689
                          :|:|..:.||:        ||......|| .:.|||.              
Mouse   286 --------------TRSLPDRTPFH--------TSLHSGTSKS-SSLPSYG-------------- 313

  Fly   690 FKTTTLPYIRNGFSSDFSYGGLGDKTHSTDLSCGKSEASVDSITEGD-RRALM--GGDLP 746
              .|||                 .:..||:.|...|||....:..|: :|..|  |..||
Mouse   314 --RTTL-----------------SRLQSTEFSPSGSEAGSPGLQNGEGQRGRMDRGNSLP 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Unc-115bNP_731390.1 LIM1_abLIM 46..97 CDD:188713
LIM2_abLIM 102..157 CDD:188714
LIM3_abLIM 211..262 CDD:188715
LIM4_abLIM 270..326 CDD:188716
DmtnXP_036014334.1 AbLIM_anchor 8..374 CDD:465046 88/385 (23%)
VHP 389..424 CDD:128458
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.