DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and Tmed5

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_083152.1 Gene:Tmed5 / 73130 MGIID:1921586 Length:229 Species:Mus musculus


Alignment Length:230 Identity:54/230 - (23%)
Similarity:92/230 - (40%) Gaps:44/230 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ALILCVLHSACG--------LYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSP- 64
            ||...:|..|.|        ..|.:....::||.:.:|.:.::.:.|:|.........|..:|| 
Mouse    16 ALPAALLRGAAGFTPSLDSDFTFTLPAGRKECFYQPMPLKASLEIEYQVLDGGELDIDFHLTSPE 80

  Fly    65 GIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHT----PGEHVICMFSNSTAWFSGAQLRVHLDI- 124
            |..:..|.|.||.                 .||    .|:::.| |.|:.:..|...:...|.: 
Mouse    81 GRTLVFEQRKSDG-----------------VHTIETEDGDYMFC-FDNTFSTISEKVIFFELILD 127

  Fly   125 QVGEHAIDYAHVAQKEKLTE---LQLRIRQLLDQVEQITKE-------QNYQRYREERFRHTSES 179
            .:||..  ......|:.:|.   |::::..:|:.:..|...       |...|..|.|.|:..||
Mouse   128 NMGEEV--QGQEDWKKYITNTDVLEMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQES 190

  Fly   180 TNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFEAKK 214
            ...||.:||:...:|:|.:...|:..|||.||.|:
Mouse   191 NFDRVNFWSVVNLMVMVVVSAIQVYTLKSLFEDKR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 47/214 (22%)
Tmed5NP_083152.1 EMP24_GP25L 35..222 CDD:426051 46/206 (22%)

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