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Protein Alignment eca and Tmed3

DIOPT Version :10

Sequence 1:	NP_788616.1	Gene:	eca / 41177	FlyBaseID:	FBgn0069242	Length:	216	Species:	Drosophila melanogaster
Sequence 2:	NP_079636.2	Gene:	Tmed3 / 66111	MGIID:	1913361	Length:	221	Species:	Mus musculus

Alignment Length:	228	Identity:	61/228 - (26%)
Similarity:	103/228 - (45%)	Gaps:	39/228 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 QFISLALILCVLHS----ACGLYFHISETERKCFIEEVPD------ETTVIV--NYKVELY--DP 54
            |.:...|:|.:|.:    :..|.|.:.:..::||.|||..      :..||.  :|.|:.|  ||
Mouse    12 QMLLQLLLLLLLRAEPLRSAELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDP 76

  Fly    55 RSNGFMPSSPGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLR 119
            |.|            |..|::      .:.|.|   .::.:...|.:..| |||..:.||  ...
Mouse    77 RGN------------VIYRET------KKQYDS---FTYKTEAKGVYRFC-FSNEFSTFS--HKT 117

  Fly   120 VHLDIQVGEHAIDYAHVAQK-EKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSR 183
            |:.|.|||:.......:..: ..||:::.....:.:.::.:...|.:.|.||.:.|..:|..|||
Mouse   118 VYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSR 182

  Fly   184 VLWWSLAQTVVLVCMGFWQMRHLKSFFEAKKLV 216
            |.:||:.:|:.|..:.|.|:..|||||..|:.|
Mouse   183 VSYWSVGETIALFVVSFSQVLLLKSFFTEKRPV 215

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.