DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and tmed9

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001028280.2 Gene:tmed9 / 613145 ZFINID:ZDB-GENE-050417-434 Length:223 Species:Danio rerio


Alignment Length:220 Identity:142/220 - (64%)
Similarity:178/220 - (80%) Gaps:4/220 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRDQFISLALILCVLHSA--CGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSS 63
            :|.||....|:|..::::  ..|||||.|||:||||||:||||.:|.||:.:|||.:...::|::
Zfish     4 IRMQFTLYFLVLLNIYNSLVSALYFHIGETEKKCFIEEIPDETMIIGNYRTQLYDKQKEEYLPAT 68

  Fly    64 PGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNST--AWFSGAQLRVHLDIQV 126
            .|:||.|||:|.|:|::|||.|.|:||..|||||||||.||:.|||:  |.|:|..|||||||||
Zfish    69 QGLGMFVEVKDPDEKVILSRQYGSEGRFIFTSHTPGEHQICLHSNSSKFALFAGGMLRVHLDIQV 133

  Fly   127 GEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQ 191
            |||..:||.:|.|:||||||||:|||::||:||.||||||||||||||.||||||.||||||:.|
Zfish   134 GEHTNNYAEIAAKDKLTELQLRVRQLMEQVDQIQKEQNYQRYREERFRQTSESTNQRVLWWSIVQ 198

  Fly   192 TVVLVCMGFWQMRHLKSFFEAKKLV 216
            |::||.:||||||||||||||||||
Zfish   199 TLILVAIGFWQMRHLKSFFEAKKLV 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 130/192 (68%)
tmed9NP_001028280.2 None

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