DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and Tmed2

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001390182.1 Gene:Tmed2 / 56334 MGIID:1929269 Length:208 Species:Mus musculus


Alignment Length:220 Identity:61/220 - (27%)
Similarity:102/220 - (46%) Gaps:30/220 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALILCVLHSACGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEV 72
            |||:..:|.:|.|.:..|.....:||.|.|...|.:.:     :::....||      :.:.||:
Mouse     8 LALLAALLATASGYFVSIDAHAEECFFERVTSGTKMGL-----IFEVAEGGF------LDIDVEI 61

  Fly    73 RDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDI-----------QV 126
            ...|:|.:......|.|:.:|.:|..|.:..| |||..:..:...:...:||           :.
Mouse    62 TGPDNKGIYKGDRESSGKYTFAAHMDGTYKFC-FSNRMSTMTPKIVMFTIDIGEAPKGQDMETEG 125

  Fly   127 GEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQ 191
            |..:.|    |.:.||.|:   |.:|...:..:..||.|...||...|..:::|||||:.||..:
Mouse   126 GGDSWD----AHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFE 183

  Fly   192 TVVLVCMGFWQMRHLKSFFEAKKLV 216
            .:|||.|...|:.:||.|||.:::|
Mouse   184 ALVLVAMTLGQIYYLKRFFEVRRVV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 53/201 (26%)
Tmed2NP_001390182.1 EMP24_GP25L 20..203 CDD:426051 53/201 (26%)

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