DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and tmed5

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_031755940.1 Gene:tmed5 / 549314 XenbaseID:XB-GENE-951292 Length:223 Species:Xenopus tropicalis


Alignment Length:206 Identity:47/206 - (22%)
Similarity:90/206 - (43%) Gaps:32/206 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE--VRDSDDKIVLSRVY 85
            |.:...:::||.:.:..:.|:.:.|:|             ..|.|:.|:  :...:.:::||...
 Frog    32 FTLPAGQKECFFQPMKRDATLEIEYQV-------------LDGAGLDVDFSLTSPNGELLLSEER 83

  Fly    86 SSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHVAQ--KEKLTE---L 145
            .|.| :.......|::..| |.||   ||....:|.....:.:|..|..:..:  |..:|.   |
 Frog    84 QSDG-VHSVETIDGDYQFC-FDNS---FSRMSEKVIFFELILDHLNDEGNELEDWKSYITGTDLL 143

  Fly   146 QLRIRQLLDQVE----QITKEQNYQ---RYREERFRHTSESTNSRVLWWSLAQTVVLVCMGFWQM 203
            .:::..:|:.:.    ::||....|   :..|.|.|:..||...||.:||:....|:|.:...|:
 Frog   144 DMKLEDILETINSVKGRLTKSAQIQTLLKAFEARDRNLQESNFERVTFWSVFNLTVMVVVSALQV 208

  Fly   204 RHLKSFFEAKK 214
            ..|:|.||.|:
 Frog   209 YMLRSLFEDKR 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 44/201 (22%)
tmed5XP_031755940.1 EMP24_GP25L 29..216 CDD:426051 44/201 (22%)

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