DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and TMED9

DIOPT Version :9

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_059980.2 Gene:TMED9 / 54732 HGNCID:24878 Length:235 Species:Homo sapiens


Alignment Length:212 Identity:141/212 - (66%)
Similarity:174/212 - (82%) Gaps:2/212 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILCVLHSACGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE 71
            :|.|:|.:......|||||.|||:||||||:||||.||.||:.:|||.:...:.|::||:||.||
Human    24 TLLLVLWLATRGSALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLGMFVE 88

  Fly    72 VRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAW--FSGAQLRVHLDIQVGEHAIDYA 134
            |:|.:||::|:|.|.|:||.:|||||||||.||:.||||.:  |:|..|||||||||||||.|||
Human    89 VKDPEDKVILARQYGSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYA 153

  Fly   135 HVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMG 199
            .:|.|:||:|||||:|||::|||||.|||||||:||||||.||||||.||||||:.||::||.:|
Human   154 EIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIG 218

  Fly   200 FWQMRHLKSFFEAKKLV 216
            .||||||||||||||||
Human   219 VWQMRHLKSFFEAKKLV 235

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:279450 131/192 (68%)
TMED9NP_059980.2 EMP24_GP25L 37..230 CDD:307313 131/192 (68%)
Required for interaction with STX17. /evidence=ECO:0000269|PubMed:21545355 121..160 25/38 (66%)
COPI vesicle coat-binding. /evidence=ECO:0000255 228..235 6/6 (100%)