DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eca and tmed9

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001011147.1 Gene:tmed9 / 496564 XenbaseID:XB-GENE-944838 Length:217 Species:Xenopus tropicalis


Alignment Length:211 Identity:137/211 - (64%)
Similarity:170/211 - (80%) Gaps:2/211 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALILCVLHSACGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVEV 72
            |.|:......|..|||||.|||:||||||:||||.|:.||:.:::|.:...::|::||:||.|||
 Frog     7 LLLLAACFGPAFSLYFHIGETEKKCFIEEIPDETMVVGNYRTQMFDKQREDYLPATPGLGMFVEV 71

  Fly    73 RDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNST--AWFSGAQLRVHLDIQVGEHAIDYAH 135
            :|.|||::|||.|.|:||.:|||||||||.||:.||||  |.|:|..|||||||||||||.||..
 Frog    72 KDPDDKVILSRQYGSEGRFTFTSHTPGEHQICLHSNSTKFALFAGGMLRVHLDIQVGEHANDYVD 136

  Fly   136 VAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMGF 200
            :|.|:||..||||:|||::|||||.|||||||:||||||.|||||:.||||||:|||::||.:|.
 Frog   137 IAAKDKLNTLQLRVRQLIEQVEQIQKEQNYQRWREERFRQTSESTSQRVLWWSIAQTLILVTIGV 201

  Fly   201 WQMRHLKSFFEAKKLV 216
            |||:|||.||||||||
 Frog   202 WQMKHLKGFFEAKKLV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 127/192 (66%)
tmed9NP_001011147.1 EMP24_GP25L 19..212 CDD:426051 127/192 (66%)

Return to query results.
Submit another query.