DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and opm

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_061497906.1 Gene:opm / 4576804 VectorBaseID:AGAMI1_010283 Length:247 Species:Anopheles gambiae


Alignment Length:243 Identity:55/243 - (22%)
Similarity:95/243 - (39%) Gaps:51/243 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILCVLH-SACGLY-------FHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSS 63
            |..|:|.:|. |..|::       .:::.....||.|......|:.:.|:|          :...
Mosquito    20 SYPLLLSLLQLSTLGVFALQKELTINVAPGNVDCFFESAKAGQTIDIEYQV----------IDGG 74

  Fly    64 PG-IGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICM---FSNS---TAWF------SG 115
            .| :.:..|:.::..:.:.:....|.....|.....||:..|.   ||.|   |.:|      .|
Mosquito    75 HGDLDISFELAEATGRTIFADYKKSDNIHQFPVPYDGEYKFCFDNGFSRSNSKTVFFELIIGREG 139

  Fly   116 AQLRVHLDIQVGEHAIDYAHVAQKEKLTELQL--------RIRQLLDQVEQITKEQNYQRYREER 172
            .|     |...|...||.......|:..::::        |:|..|.:..|:   |:..|..|.|
Mosquito   140 DQ-----DDPAGWSDIDLLDGLTPEEFYDMKVQDMEDAIKRVRNNLTKARQL---QDVLRSHEAR 196

  Fly   173 FRHTSESTNSRVLWWSLAQTVVLVCMGFWQMRHLKSFFE----AKKLV 216
            .|:.:|....:|..||..|.:|:|.:|..|:..:||.|:    |.||:
Mosquito   197 DRNVAEENYFKVNVWSFFQILVMVAVGTLQVFMVKSLFDVDSRAYKLL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 46/218 (21%)
opmXP_061497906.1 None

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