DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and tmed7

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_998077.2 Gene:tmed7 / 405848 ZFINID:ZDB-GENE-040426-2570 Length:216 Species:Danio rerio


Alignment Length:214 Identity:48/214 - (22%)
Similarity:98/214 - (45%) Gaps:22/214 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FISLALILCVLHSACGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMH 69
            |:.:.::...|.||..|.|.:.:..::||.|::...|...:.::|.               .|.|
Zfish    13 FVQVVMMKVGLSSASELTFELPDNAKQCFYEDITIGTKCTLEFQVV---------------TGGH 62

  Fly    70 VEV----RDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHA 130
            .:|    .|.:..::...:.......:|::...|.:..| |||..:.|:  ...|:.|.|||:..
Zfish    63 YDVDCRLEDPEGTVLYKEMKKQYDSFTFSAARNGTYKFC-FSNEFSTFT--HKTVYFDFQVGDDP 124

  Fly   131 IDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195
            ..:.:..:...||:::.....:.:.::.:...|.:.|.||.:.|..:|..||||.:||:.:.::|
Zfish   125 PLFPNENRVTALTQMESACVSIHEALKSVMDYQTHFRLREAQGRSRAEDLNSRVAFWSVGEALIL 189

  Fly   196 VCMGFWQMRHLKSFFEAKK 214
            :.:...|:..|:|||..:|
Zfish   190 LVVSVSQVLLLRSFFSDRK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 42/194 (22%)
tmed7NP_998077.2 EMP24_GP25L 28..205 CDD:426051 42/194 (22%)

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