DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and tmed10

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_999863.1 Gene:tmed10 / 326716 ZFINID:ZDB-GENE-030131-4915 Length:209 Species:Danio rerio


Alignment Length:213 Identity:63/213 - (29%)
Similarity:115/213 - (53%) Gaps:15/213 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSACGLYFHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHV 70
            :||:| |.|:.|...:.|::....|||..||:..:..|...|::.           ..|....::
Zfish     9 LSLSL-LFVIQSVLSISFYLPVRSRKCLREEIHKDVLVTGEYEIS-----------EQPNTKTNL 61

  Fly    71 EVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSG--AQLRVHLDIQVGEHAIDY 133
            ::.||...|:..:..:::|:.:||:.......:| |.:.:...:|  ...:::||::.|..|.:|
Zfish    62 KITDSSGHILYVKEDATKGKFAFTTEDYDMFEVC-FESKSPMGTGRVPDQQINLDMKHGVEAKNY 125

  Fly   134 AHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCM 198
            ..:|:.|||..|::.:|:|.|..|.|..:..|.:.|||..|.|:||||:|||::|:.....|:.:
Zfish   126 EEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMCCLIGL 190

  Fly   199 GFWQMRHLKSFFEAKKLV 216
            ..||:.:|:.||:||||:
Zfish   191 ATWQVFYLRRFFKAKKLI 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 52/192 (27%)
tmed10NP_999863.1 EMP24_GP25L 22..203 CDD:426051 52/192 (27%)

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