DRSC/TRiP Functional Genomics Resources

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Protein Alignment eca and opm

DIOPT Version :10

Sequence 1:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_572994.1 Gene:opm / 32435 FlyBaseID:FBgn0264389 Length:242 Species:Drosophila melanogaster


Alignment Length:237 Identity:50/237 - (21%)
Similarity:91/237 - (38%) Gaps:56/237 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISLALILCVLHSA------CGLYFHISETERKCFIEEVPDETTVIVNYKV------------ELY 52
            :|:|.:|..:..|      ..:|....:||  |....|....|:...|:|            .|.
  Fly    15 LSIAALLLGVQDAEAYDKEMTVYVDAGKTE--CLYHSVRQGETIDFEYQVIDGGHGDLDISFTLL 77

  Fly    53 DPRSNGFMPSSPGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQ 117
            ||           ||:          :::|.....:..........|::..| |.||.:.|:...
  Fly    78 DP-----------IGL----------VIVSDFKKPENVHRHEVAKEGDYRFC-FDNSFSMFNRKT 120

  Fly   118 LRVHLDIQ-VGEHAIDYAHVAQKEKLTEL------QLRIRQLLDQVE----QITKEQNYQ---RY 168
            :...|.:: .||.........:.::||.|      .::::.::|.:.    |:||.:..|   |.
  Fly   121 VFFELIVEREGEELQGDTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRS 185

  Fly   169 REERFRHTSESTNSRVLWWSLAQTVVLVCMGFWQMRHLKSFF 210
            .|.|.|:.:||...:|..||:.|...::.:|..|:..|:|.|
  Fly   186 HEARDRNLAESNFQKVNHWSMVQISAMIGVGLIQVFMLRSIF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 46/217 (21%)
opmNP_572994.1 EMP24_GP25L 33..227 CDD:426051 45/217 (21%)

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