DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18542 and Nat8b

DIOPT Version :10

Sequence 1:NP_649928.1 Gene:CG18542 / 41176 FlyBaseID:FBgn0037731 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_598242.1 Gene:Nat8b / 171084 RGDID:621605 Length:222 Species:Rattus norvegicus


Alignment Length:211 Identity:35/211 - (16%)
Similarity:70/211 - (33%) Gaps:42/211 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TLQFIVITWAIFFIFLGVPLLFCA-----LTVPACIFCLFTGTYFSFYSKAVELMRTKPSQSLVA 102
            |.:.:::......:.|||.|....     |....|||.|....:|         :..:|.::.|:
  Rat    32 TFRHLLLLPRTLLLLLGVSLALVLVSGSWLLAVVCIFFLLPFLWF---------LAGQPWKNYVS 87

  Fly   103 ECYEPFIFRCSPKEASYQIFTENCPYEETY---------TRKFRRRI---VAAISVKNHHAVYNA 155
            :|                :.|:.....::|         ..:...::   |.|:.||...:....
  Rat    88 KC----------------LHTDMADITKSYLSDRGSGFWVAESGEQVVGTVGALPVKEPPSGRKQ 136

  Fly   156 AWIYRFAIDPHYPCQTIMDPMIKLVVKNCIIGGYASLECTISEWQESERDFYDDFGFVTRQIYHK 220
            ..::..|:...:..|.|...:::.|::.....||..:....|..|......|...||.....|..
  Rat   137 LQLFHLAVSSQHRGQGIAKALVRTVLQFARDQGYTDVVLETSTMQIGAVTLYLGMGFQKTGQYFP 201

  Fly   221 KIIGSSLAVMKTQLTY 236
            .::...:.:...||.|
  Rat   202 SMLWRLVGIRFVQLNY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18542NP_649928.1 None
Nat8bNP_598242.1 hydrophobic domain 36..80 10/52 (19%)
ArgA 97..198 CDD:440859 16/100 (16%)
consensus motif D 109..126 2/16 (13%)
consensus motif A 131..166 4/34 (12%)
consensus motif B 174..194 4/19 (21%)

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