DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18542 and LOC100537649

DIOPT Version :10

Sequence 1:NP_649928.1 Gene:CG18542 / 41176 FlyBaseID:FBgn0037731 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_021325530.1 Gene:LOC100537649 / 100537649 -ID:- Length:233 Species:Danio rerio


Alignment Length:243 Identity:44/243 - (18%)
Similarity:87/243 - (35%) Gaps:49/243 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VIRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFRE----ITLQFIVITWAI-------FFIFLG 59
            :||.|...|:.....|.|..|:.....:||.....:    :||...|..:.:       .|:|.|
Zfish     9 IIRPYKPTDKSAIVSLFRFGILEHIYPAFFKAMSHQDHIGVTLSVSVAGYVLGGSSYFQAFLFGG 73

  Fly    60 VPLLFCALTVPACI--FCLFTGTYFSFYSKAVELMRTKPSQSLVAECYEPFIFRCSPKEASYQIF 122
                     ..||:  :|... .|.|..::.:||.        :|:....|:   ..::..:.:.
Zfish    74 ---------AWACLVYYCCHE-IYQSHLNRKLELE--------MADIQANFL---DNQDNKFWVL 117

  Fly   123 TENCPYEETYTRKFRRRIVAAISVK----NHHAVYNAAWIYRFAIDPHYPCQTIMDPMIKLVVKN 183
            .     .|.|.|.....::|.:..|    |   ..|||.:::..:......:.:...:::..::.
Zfish   118 E-----TEMYGRTKVSGMLAVVGAKADVLN---ADNAAEVFQLIVSFQKRRKGLGTQLVEKAIEF 174

  Fly   184 CIIGGYASLECTISEWQESERDFYDDFGFVTRQIY---HKKIIGSSLA 228
            |...|.:.|...:|..|.:....:...||:...::   |...:.|.||
Zfish   175 CKEQGLSCLAVEVSSPQTAAISLFRKLGFIETSVHNNTHSNHLFSKLA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18542NP_649928.1 None
LOC100537649XP_021325530.1 ArgA 102..233 CDD:440859 21/132 (16%)

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