DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18542 and LOC100489681

DIOPT Version :10

Sequence 1:NP_649928.1 Gene:CG18542 / 41176 FlyBaseID:FBgn0037731 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_004921026.2 Gene:LOC100489681 / 100489681 XenbaseID:XB-GENE-29079835 Length:220 Species:Xenopus tropicalis


Alignment Length:237 Identity:38/237 - (16%)
Similarity:73/237 - (30%) Gaps:83/237 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IRNYTQDDELKCQELVRDYIMSFSNKSFFVYCFREITLQFIVITWAIFF--IFLGVPLLFCALTV 69
            ||.|.:.|......|..:..|    :.|...|...:....:.:|..:.|  :.||......:.| 
 Frog     6 IRKYRKKDYAAVCHLFAEGTM----EHFPAACLYVLKAPRVYVTLLLLFASMLLGTKSYILSFT- 65

  Fly    70 PACIFCLFTGTYF----SFYSKAVELMRTKPSQSLVAECYEPFIFRCSPKEASYQIFTENC---- 126
              |:..:..|.::    .|::..:|:.|.....:                |.:|.:.:.:|    
 Frog    66 --CLAAILAGGWWVINSKFHNYVIEIQREDLQDT----------------ETTYMVRSNSCFWVA 112

  Fly   127 -------------PYEET----------YTRKFRRRIVA-----------------AISVKNHHA 151
                         |.||:          ..|..||:.:|                 |:.::....
 Frog   113 ESDGKVVGMVAAQPSEESEDEMVLKRLCVGRDHRRKGIAKALCLKVIGFAKECGYKAVCLETDII 177

  Fly   152 VYNAAWIY------RFAIDPHY----PCQTIMDPMIKLVVKN 183
            .|:|..:|      ::.::.|.    .|.|.:....|..|.|
 Frog   178 QYSAQKLYQRIGFQKYRLEVHQGLFGKCPTFLSLYYKYTVTN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18542NP_649928.1 None
LOC100489681XP_004921026.2 ArgA 85..191 CDD:440859 16/121 (13%)

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