DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18542 and nat8

DIOPT Version :10

Sequence 1:NP_649928.1 Gene:CG18542 / 41176 FlyBaseID:FBgn0037731 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_001342614.1 Gene:nat8 / 100002956 ZFINID:ZDB-GENE-141216-110 Length:221 Species:Danio rerio


Alignment Length:226 Identity:42/226 - (18%)
Similarity:79/226 - (34%) Gaps:47/226 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVIRNYTQDDELKCQEL----VRDYIMSFSNKSFFVYCFREITLQFIVITWAIFFIFLGVPLLFC 65
            :.||.|.::|..:.:|:    :.::|.|        .|..       |:...:..:|||      
Zfish     4 VQIRQYREEDLEEVKEVFTIGMSEHIPS--------SCMH-------VLKQPLAQMFLG------ 47

  Fly    66 ALTVPACIFCLFTGTYFSFYSK--AVELMRTKPSQSLVAECY--EPFIFRCSPKEASY--QIFTE 124
                  |:||....:..|....  ||.|:.....||:   ||  ..:|.....::.|:  |.:.:
Zfish    48 ------CVFCALLTSSMSILLPVLAVTLLLAAGRQSV---CYMFNKYIQTSLEQDLSHIQQTYMD 103

  Fly   125 NCPYEETYTRKFRRRIVAAISVKNHHAVYNAAWIYRFAIDPHYPCQTIMDPMIKLVVKNCIIGGY 189
            . |....:..:.:.|:|..:.........|...:.|.::...:..:.|...:.:.|.......||
Zfish   104 P-PNACVWVAESQGRVVGTVGCFPSENDKNFLELKRMSVKKAHRGKGIAKALCRTVADFARERGY 167

  Fly   190 ASLECTISEWQESERDFYDDFGFVTRQIYHK 220
            ..:....|..|...:..|:..|      |||
Zfish   168 LGVILHTSVVQTDAQKLYEHMG------YHK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18542NP_649928.1 None
nat8XP_001342614.1 ArgA 97..215 CDD:440859 17/103 (17%)

Return to query results.
Submit another query.