DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9444 and PTR3

DIOPT Version :9

Sequence 1:NP_001262431.1 Gene:CG9444 / 41175 FlyBaseID:FBgn0037730 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_199417.1 Gene:PTR3 / 834646 AraportID:AT5G46050 Length:582 Species:Arabidopsis thaliana


Alignment Length:578 Identity:133/578 - (23%)
Similarity:230/578 - (39%) Gaps:168/578 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 RAVFFVLATKFFEAFAANGIRTVLALYLRDDLNFTESFSTVVLH---------IFNFFGQ--FCP 122
            :|..||:..:.||..|..||.:.|.:|:           |..||         :.|:.|.  ..|
plant    32 KACSFVVVYEVFERMAYYGISSNLFIYM-----------TTKLHQGTVKSSNNVTNWVGTSWLTP 85

  Fly   123 IIGAILADSYIGNVRTISGFSFIYAFGWLLLTLT-SLPAMGLP-------------MVLLVSI-- 171
            |:||.:.|:.:|...|......||..|.::|||: ::|.:..|             .||.:::  
plant    86 ILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFF 150

  Fly   172 -ALLFIAVGNGSIRACITSLGALQFKL--PEQSVHLAEYFSFYYFVYYFGIFLSKILPPLVRANT 233
             ||..:|:|.|..:..|:::||.||.:  |::......:|:::.|..:||...:..:...|:.|.
plant   151 GALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNV 215

  Fly   234 QCFDKAECYPAVFG--TLGAAFMMAWFIFLVGKWFYK-----------------------SEKLS 273
            .       :...:|  |||.|..:.  |||:|..||:                       :..::
plant   216 G-------WTLGYGLPTLGLAISIT--IFLLGTPFYRHKLPTGSPFTKMARVIVASFRKANAPMT 271

  Fly   274 DD------------------------NILFKFCGCIKTALVEKWRRRKSTKRSNYWLHNAVVAYD 314
            .|                        ::.|.....:||....||....:|:              
plant   272 HDITSFHELPSLEYERKGAFPIHPTPSLRFLDRASLKTGTNHKWNLCTTTE-------------- 322

  Fly   315 MGFVNDVSRVLRISKLFIPLPFYF------ALLAQQDSSWTFQATQMNTTLMG-VTIQPDQAKAV 372
               |.:..::||:      ||..|      .:|||.::.:..|.|.::..:.| .:|.|  |...
plant   323 ---VEETKQMLRM------LPVLFITFVPSMMLAQINTLFVKQGTTLDRKVTGSFSIPP--ASLS 376

  Fly   373 GPIFLFMLIP--LWQYITVPLLRRYFNWELQP-----LHSVTVGGIFSAGAFFCAGALQE-RIKN 429
            |.:.|.|||.  |:..:.|.:.|::..   .|     |..:.:|.||.......|...:. |:|.
plant   377 GFVTLSMLISIVLYDRVFVKITRKFTG---NPRGITLLQRMGIGLIFHILIMIVASVTERYRLKV 438

  Fly   430 SPP-----QT-----VNIAWQLPQFLLLMMGELLLSIPGLQFAFTQAPTSMKSVVTAAWFLNNAF 484
            :..     ||     :.|...||||:|:.|.:..|.:..|:|.:.|||.||||:.|:....:.|.
plant   439 AADHGLIHQTGVKLPLTIFALLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAI 503

  Fly   485 GN----LIVVLVTEL------GMLSSQMAE------YFFYAVVMLVCIILYALLAFDY 526
            ||    .::..|:|:      |.:.:.:.|      |.|:||:.||..:|:.::...|
plant   504 GNFMSSFLLSTVSEITKKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFY 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9444NP_001262431.1 PTR2 68..524 CDD:225646 132/574 (23%)
MFS 68..>190 CDD:304372 38/148 (26%)
MFS 137..488 CDD:304372 100/447 (22%)
PTR3NP_199417.1 MFS_NPF5 31..563 CDD:340975 133/578 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

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