DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9444 and PTR4

DIOPT Version :9

Sequence 1:NP_001262431.1 Gene:CG9444 / 41175 FlyBaseID:FBgn0037730 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_178311.1 Gene:PTR4 / 814733 AraportID:AT2G02020 Length:545 Species:Arabidopsis thaliana


Alignment Length:566 Identity:142/566 - (25%)
Similarity:243/566 - (42%) Gaps:82/566 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSQVGYERDARDVEWVAWRGERAQLKL-AHRSSLPNYGFAPPTIRMKYRYPRAVFFVLATKFFEA 82
            ::.:..||...:||....:.|   :|| |...|:..:|  .|.::......:|..|:.|.:..|.
plant     1 MASIDEERSLLEVEESLIQEE---VKLYAEDGSIDIHG--NPPLKQTTGNWKACPFIFANECCER 60

  Fly    83 FAANGIRTVLALYLRDDLNFTESFSTVVLHIFNFFG--QFCPIIGAILADSYIGNVRTISGFSFI 145
            .|..||...|..|..::|:  |:..:...|:..:.|  ...|:|||::||:|.|...||:.||.|
plant    61 LAYYGIAKNLITYFTNELH--ETNVSAARHVMTWQGTCYITPLIGALIADAYWGRYWTIACFSAI 123

  Fly   146 YAFGWLLLTLT-SLPAMG--------LPMVLLVSIALLF-----IAVGNGSIRACITSLGALQFK 196
            |..|.:.|||: |:|.:.        .|...:|...:||     ||:|.|.|:.|::|.||.||.
plant   124 YFTGMVALTLSASVPGLKPAECIGSLCPPATMVQSTVLFSGLYLIALGTGGIKPCVSSFGADQFD 188

  Fly   197 L--PEQSVHLAEYFSFYYFVYYFGIFLSKILPPLVRANTQCFDKAECYPAVFGTLGAAFMMAWFI 259
            .  |.:.|..|.:|:::||....|.|:|..:...::.| ..::.....|.||  :|.|.|.    
plant   189 KTDPSERVRKASFFNWFYFTINIGAFVSSTVLVWIQEN-YGWELGFLIPTVF--MGLATMS---- 246

  Fly   260 FLVGKWFYKSEKLSDDNILFKFCGCIKTALVEKWRRR----------KSTKRSNYWLHNAVVAYD 314
            |..|...|:.:|.....|.     .:...||..:|:.          :....:|.|....|..  
plant   247 FFFGTPLYRFQKPRGSPIT-----SVCQVLVAAYRKSNLKVPEDSTDEGDANTNPWKLCTVTQ-- 304

  Fly   315 MGFVNDVSRVLRISKLFIPLPFYFALLAQQDSSWTFQATQMNTTLMGVTIQPDQAKAVGPIFLFM 379
               |.:|..:||:..::.....:..|.:|..:.:..|...|..|:....|.|..........:.:
plant   305 ---VEEVKILLRLVPIWASGIIFSVLHSQIYTLFVQQGRCMKRTIGLFEIPPATLGMFDTASVLI 366

  Fly   380 LIPLWQYITVPLLRRYFN-----WELQPLH--------SVTVGGIFSAGAFFCAGALQERIKNSP 431
            .:|::..:.|||:||:..     .|||.:.        |:|...|........|..| :.:::..
plant   367 SVPIYDRVIVPLVRRFTGLAKGFTELQRMGIGLFVSVLSLTFAAIVETVRLQLARDL-DLVESGD 430

  Fly   432 PQTVNIAWQLPQFLLLMMGELLLSIPGLQFAFTQAPTSMKSVVTAAWFLNNAFGN----LIVVLV 492
            ...:||.||:||:.|:....:...:..::|.:.|:|.||:|:.:|...|....||    ||:.||
plant   431 IVPLNIFWQIPQYFLMGTAGVFFFVGRIEFFYEQSPDSMRSLCSAWALLTTTLGNYLSSLIITLV 495

  Fly   493 TELG---------MLSSQMAEYFFYAVVML--VCIILYALLAFDYT 527
            ..|.         .:::...:|||:.:|.|  |.|.::...:..||
plant   496 AYLSGKDCWIPSDNINNGHLDYFFWLLVSLGSVNIPVFVFFSVKYT 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9444NP_001262431.1 PTR2 68..524 CDD:225646 129/511 (25%)
MFS 68..>190 CDD:304372 43/137 (31%)
MFS 137..488 CDD:304372 96/393 (24%)
PTR4NP_178311.1 PTR2 114..497 CDD:279226 100/400 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 120 1.000 Domainoid score I1880
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 222 1.000 Inparanoid score I1193
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 1 1.000 - - otm3141
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.880

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