DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9444 and slc15a4

DIOPT Version :9

Sequence 1:NP_001262431.1 Gene:CG9444 / 41175 FlyBaseID:FBgn0037730 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_001307458.1 Gene:slc15a4 / 393932 ZFINID:ZDB-GENE-040426-1047 Length:578 Species:Danio rerio


Alignment Length:566 Identity:130/566 - (22%)
Similarity:225/566 - (39%) Gaps:141/566 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VLATKFFEAFAANGIRTVLALYLRDDLNFTES---------FSTVVLHIFNFFGQFCPIIGAILA 129
            :|..:..|..|..||.:.|.|:|.....:.|.         |..|...|..|        |..||
Zfish    36 ILLAESLERMAFYGITSNLVLFLNSSPFYWEGTLASQGPLIFMGVTYLISPF--------GGWLA 92

  Fly   130 DSYIGNVRTISGFSFIYAFGWLL-------------------------------------LTLTS 157
            |:|:|...||:....:|..|.||                                     :|..:
Zfish    93 DAYLGKFLTIALSLGLYLLGMLLFPFVASDNTRNYLCGEEMAFPVQPAECFPENGTVPANVTCVN 157

  Fly   158 LPAMGLPMVLLVSIALLFIAVGNGSIRACITSLGALQFK--LPEQSVHLAEYFSFYYFVYYFGIF 220
            .|:...|.:.   ..|:.:|:|.|::::.||..||.|.|  .||.:   ..:|:::|:....|..
Zfish   158 RPSYCRPAIY---SGLVLVALGVGAVKSNITPFGADQVKDRGPEAT---RRFFNWFYWCINLGAI 216

  Fly   221 LSKILPPLVRANTQCFDKAECYPAVFGTLGAAFMMAWFIFLVGKWFY-----KSEKLSDDNILFK 280
            .|......::.|.. |......|||  .||.:.:    ||.:||..:     .....||   :|:
Zfish   217 FSLGGIAYIQQNIS-FSIGYIIPAV--CLGVSLI----IFFLGKAVFITKPADGSAFSD---MFR 271

  Fly   281 FCGCIKTALVEKWRRRKSTKRSN-YWLHNAVVAYDMGF----VNDVSRVLRISKLFIPLPFYFAL 340
            ..|   :||..:..:..|..|.. ..|..|.|.|...|    |.:|..:::|..:|:.|..|:.:
Zfish   272 ILG---SALCGRGPKEPSLLRPKPTVLDGAKVTYGGRFSDEKVEEVKSLVKILPVFLALIPYWTV 333

  Fly   341 LAQQDSSWTFQATQMNTTLMGVTIQPDQAKA--------------VGPIFLFMLIPLWQYITVPL 391
            ..|..:::..|:  ::.|:.|.  .|:...:              ...:.:.|||||...:..|:
Zfish   334 YFQMQTTYYLQS--LHLTIPGA--DPNSTDSHPNTFRFPAAWLTMFDAVLILMLIPLKDKVVDPI 394

  Fly   392 LRRYFNWELQP--LHSVTVGGIFSAGAFFCAGALQE------RIKNSPPQTVN----------IA 438
            |:|.   .|.|  |..:.||..|...:...||.|:.      |.:...||::.          |.
Zfish   395 LKRK---GLLPSSLKRIAVGMFFVMCSAVAAGILETKRLDIVRTRGPIPQSLGGVIYYAADLPIW 456

  Fly   439 WQLPQFLLLMMGELLLSIPGLQFAFTQAPTSMKSVVTAAWFLNNAFGN------LIVVLVTELGM 497
            ||:||::|:.:.|:..||.||:||::.||.||:|.:...:|..:..|:      |.:|.:..:|.
Zfish   457 WQVPQYVLIGVSEIFASIAGLEFAYSAAPRSMQSAIMGLFFFFSGIGSFVGSGLLAIVSLKAIGW 521

  Fly   498 LSSQM---------AEYFFY--AVVMLVCIILYALLAFDYTLQERK 532
            :||..         ..|:|:  |.:..:.::::.:::..|..|:.|
Zfish   522 MSSHQDFGNINECRLNYYFFLLAAIQGITLLIFLIVSVKYDKQKPK 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9444NP_001262431.1 PTR2 68..524 CDD:225646 127/556 (23%)
MFS 68..>190 CDD:304372 34/161 (21%)
MFS 137..488 CDD:304372 100/437 (23%)
slc15a4NP_001307458.1 MFS 158..522 CDD:304372 96/389 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X63
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.