DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9444 and Slc15a4

DIOPT Version :9

Sequence 1:NP_001262431.1 Gene:CG9444 / 41175 FlyBaseID:FBgn0037730 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_653359.1 Gene:Slc15a4 / 246280 RGDID:708469 Length:572 Species:Rattus norvegicus


Alignment Length:585 Identity:132/585 - (22%)
Similarity:229/585 - (39%) Gaps:115/585 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GERAQLKLAHRSSLPNYGFAPPTIRMKYRYPRAVFFVLATKFFEAFAANGIRTVLALYLRD-DLN 101
            ||||.|..:.|::.....||...        .|...||..:..|..|..|:...|.|:|.. ..|
  Rat     3 GERAPLLGSRRAAAAAGVFAGRR--------AACGAVLLAELLERAAFYGVTANLVLFLNGAPFN 59

  Fly   102 FTESFSTVVLHIFNFFGQFCPIIGAILADSYIGNVRTISGFSFIYAFGWLLLTLTSLP-----AM 161
            :..:.::..|.:|..........|..|||:.:|..|.|.....:|..|.|...|.:.|     ..
  Rat    60 WEGAQASQALLLFMGLTYLGSPFGGWLADARLGRARAILLSLALYLLGMLAFPLLAAPRSRSFLC 124

  Fly   162 GLPMVLLVS--------------------------IALLFIAVGNGSIRACITSLGALQFK--LP 198
            |.|...||.                          ..|:.:.:|..:::|.||..||.|.|  .|
  Rat   125 GDPHPELVRNCSAPFPNGTAVCPDAAARRCAPATFAGLVLVGLGVATVKANITPFGADQVKDRGP 189

  Fly   199 EQSVHLAEYFSFYYFVYYFGIFLSKILPPLVRANTQCFDKAECYPAVFGTLGAAFMMAWFIFLVG 263
            |.:   ..:|:::|:....|..||......::.|.. |......|.|      ...:|:.:||.|
  Rat   190 EAT---RRFFNWFYWSINLGAILSLGGIAYIQQNVS-FLTGYLIPTV------CVAIAFLVFLCG 244

  Fly   264 KWFYKSEKLSDDNILFKFCGCIKTALVEKWRRRKSTKRSNYWL--------HNAVVAYDMG---- 316
            :..:.: |..|.:   .|....:........:|...:||...|        |:...:..|.    
  Rat   245 QSVFIT-KPPDGS---AFTDMFRILTYSCCSQRGGQRRSGEGLGVFQQSSKHSLFDSCKMSRGGP 305

  Fly   317 ----FVNDVSRVLRISKLFIPLPFYFALLAQQDSSWTFQATQM------NTTLMGVTIQPDQAKA 371
                .|.||..:::|..:|:.|..|:.:..|..:::..|:..:      :.|....|:.......
  Rat   306 FTEDKVEDVKALVKIVPVFLALIPYWTVYFQMQTTYVLQSLHLKIPEISSITTTHHTLPAAWLTM 370

  Fly   372 VGPIFLFMLIPLWQYITVPLLRRYFNWELQP--LHSVTVGGIFSAGAFFCAGALQ-ERIKNSPPQ 433
            ...:.:.:||||...:..|:|||:   .|.|  |..:.||..|...:.|.||.|: :|:.....:
  Rat   371 FDAVLILLLIPLKDKLVDPVLRRH---GLLPSSLKRIAVGMFFVTCSAFAAGILESKRLDLVKEK 432

  Fly   434 TVN--------------IAWQLPQFLLLMMGELLLSIPGLQFAFTQAPTSMKSVVTAAWFLNNAF 484
            |:|              |.||:||::|:.:.|:..||.||:||::.||.||:|.:...:|..:..
  Rat   433 TINQTIGGVVYHAADLPIWWQIPQYVLIGISEIFASIAGLEFAYSAAPKSMQSAIMGLFFFFSGI 497

  Fly   485 GNLI----VVLV-----------TELGMLSSQMAEYFFY--AVVMLVCIILYALLAFDYTLQERK 532
            |:.:    :.||           |:.|.::|....|:|:  |.:....::|:.:::..|..|..:
  Rat   498 GSFVGSGLLALVSLKAIGWMSSHTDFGNINSCHLHYYFFLLAAIQGATLLLFLIVSVKYDRQRAR 562

  Fly   533  532
              Rat   563  562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9444NP_001262431.1 PTR2 68..524 CDD:225646 122/545 (22%)
MFS 68..>190 CDD:304372 33/153 (22%)
MFS 137..488 CDD:304372 96/422 (23%)
Slc15a4NP_653359.1 MFS_SLC15A3_4 25..555 CDD:340906 122/554 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3104
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55282
OrthoDB 1 1.010 - - D365203at2759
OrthoFinder 1 1.000 - - FOG0000101
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X63
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

Return to query results.
Submit another query.