DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmdyn-D7 and Nme3

DIOPT Version :10

Sequence 1:NP_649926.2 Gene:nmdyn-D7 / 41174 FlyBaseID:FBgn0028997 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_445959.1 Gene:Nme3 / 85269 RGDID:619879 Length:169 Species:Rattus norvegicus


Alignment Length:137 Identity:35/137 - (25%)
Similarity:58/137 - (42%) Gaps:8/137 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 TLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYIPMVAQLAS 312
            |...:||..::..|:|:|:......||:|.|::::..:.....|.|...| ..|.|..:|..:.|
  Rat    24 TFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYVELR-ERPFYSRLVKYMGS 87

  Fly   313 GVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRPHTLRAKFGKSKVQNAVHCTDLPDDSNL 377
            |..:.|.....|    ..|..|...|..||..|   .|.|:|..|.....:|.:|.:|..:.:..
  Rat    88 GPVVAMVWQGLD----VVRASRALIGATDPGDA---TPGTIRGDFCVEVGKNVIHGSDSVESAQR 145

  Fly   378 ELQYMFK 384
            |:...|:
  Rat   146 EIALWFR 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmdyn-D7NP_649926.2 DM10 9..97 CDD:128921
NDPk7B 246..383 CDD:239875 34/134 (25%)
Nme3NP_445959.1 NDPk_I 22..151 CDD:239876 34/134 (25%)
Blue background indicates that the domain is not in the aligned region.

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