DRSC/TRiP Functional Genomics Resources

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Protein Alignment nmdyn-D7 and Nme5

DIOPT Version :9

Sequence 1:NP_649926.2 Gene:nmdyn-D7 / 41174 FlyBaseID:FBgn0028997 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_542368.2 Gene:Nme5 / 75533 MGIID:1922783 Length:211 Species:Mus musculus


Alignment Length:146 Identity:41/146 - (28%)
Similarity:76/146 - (52%) Gaps:11/146 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 VFKNTTLAIIKPHSI-KDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVVPEYIP- 305
            ::...|||:|||..: |:..:.||   ||.:||.:...|.:.::..:|..||....|.:  :.| 
Mouse    10 IYVEKTLALIKPDVVDKEEEIQDI---ILGSGFTIIQRRKLHLSPEHCSNFYVEQYGKM--FFPN 69

  Fly   306 MVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRPHTLRAKFGKSKVQNAVHCTD 370
            :.|.::||..:.|.:|    ..|....::...||.:..:||...|.:|||.:|..:::||:|.::
Mouse    70 LTAYMSSGPLVAMILA----RHKAISYWKELMGPSNSLVAKETHPDSLRAIYGTDELRNALHGSN 130

  Fly   371 LPDDSNLELQYMFKII 386
            ....|..|:::||..:
Mouse   131 DFAASEREIRFMFPAV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmdyn-D7NP_649926.2 DM10 9..97 CDD:128921
NDK 246..387 CDD:197791 41/143 (29%)
NDPk7B 246..383 CDD:239875 39/138 (28%)
Nme5NP_542368.2 NDK 13..148 CDD:197791 41/143 (29%)
NDPk5 13..144 CDD:239880 40/139 (29%)
Dpy-30 156..197 CDD:253069
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0105
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D554381at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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