DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p23 and hacd3

DIOPT Version :9

Sequence 1:NP_001247010.1 Gene:p23 / 41173 FlyBaseID:FBgn0037728 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_001038449.1 Gene:hacd3 / 393441 ZFINID:ZDB-GENE-040426-1200 Length:359 Species:Danio rerio


Alignment Length:134 Identity:45/134 - (33%)
Similarity:70/134 - (52%) Gaps:12/134 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAAAGLIPPPVSWAQRNDLIYVIIDV-ECKDIEHKVTEKTFTFKGV-NVLDPSKKYEVTLNFLH 63
            |||    :.|.|.||||:..||:.::: :.:|:...|.|....|:|. :......:||.:|.||.
Zfish     1 MSA----LTPHVYWAQRHGEIYLRVEISDAQDLSIGVEENILQFRGQGHGAKGENEYEFSLEFLK 61

  Fly    64 EVDPEKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKLHFLKANFAKWRDESDDE----EGDQK 124
            .|.|| |..|:..|.:..|: :|....:|:.||..:.|..||..:|.:|.||||.|    |.::|
Zfish    62 PVKPE-VKHKSTQRQVNITV-RKQEEVWWNRLTKQEKKPLFLAPDFDRWLDESDAEMELREKEEK 124

  Fly   125 DNSM 128
            .|.:
Zfish   125 INKV 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p23NP_001247010.1 p23_hB-ind1_like 10..117 CDD:107222 36/108 (33%)
hacd3NP_001038449.1 p23_hB-ind1_like 6..113 CDD:107222 36/108 (33%)
PTPLA 192..346 CDD:282269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1673
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.