DRSC/TRiP Functional Genomics Resources

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Protein Alignment p23 and Ptges3l

DIOPT Version :10

Sequence 1:NP_649925.1 Gene:p23 / 41173 FlyBaseID:FBgn0037728 Length:184 Species:Drosophila melanogaster
Sequence 2:XP_008766442.1 Gene:Ptges3l / 103693432 RGDID:9413039 Length:179 Species:Rattus norvegicus


Alignment Length:167 Identity:36/167 - (21%)
Similarity:62/167 - (37%) Gaps:27/167 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IPPPVS----------WAQRNDLIYVIIDVE-CKDI-----EHKVTEKTFTFKGVNVLDPSKKYE 56
            :|.|.|          |..|...:::...|| ..|:     :|::........||.:.:      
  Rat    24 LPSPTSNLFRQHARTLWYDRPKYVFMEFCVEDSTDVSVLIEDHRIVFSCRNGDGVELYN------ 82

  Fly    57 VTLNFLHEVDPEKVTSKNIGRCLEFTIPKKAAGPYWSSLTTDKTKLHFLKANFAKWRDESDDEEG 121
             .:.|..:|:.:....|..||.:...:.|......|..||....|..:|..:|..|||...|:|.
  Rat    83 -EIEFYAKVNSKDSQDKRSGRSITCFVRKWKEKVPWPRLTKKDIKPVWLSVDFDNWRDWEGDDEM 146

  Fly   122 DQKDNSMFGNFLNSPGGDWNNKFDDFNVDDEEEDSDD 158
            :......:...||..    :.|.....:||.::|||:
  Rat   147 ELAQVEHYAELLNKV----STKRPPPAMDDLDDDSDN 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p23NP_649925.1 p23_hB-ind1_like 10..117 CDD:107222 25/122 (20%)
Ptges3lXP_008766442.1 p23 35..140 CDD:107218 22/111 (20%)

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