DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and Ecel1

DIOPT Version :9

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_068544.2 Gene:Ecel1 / 60417 RGDID:61806 Length:775 Species:Rattus norvegicus


Alignment Length:715 Identity:183/715 - (25%)
Similarity:314/715 - (43%) Gaps:118/715 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 AEFMKSYMNQSVEPCENFYEYACGNY--RNVKPDRYSPGSRSNLGDVTY-TLIDITEQLLGRMDL 118
            |.|:.:.::.|::||::||.:|||.:  |:..||          ..:|| |:..|.||...|:..
  Rat   110 ARFLSANLDASIDPCQDFYSFACGGWLRRHAIPD----------DKLTYGTIAAIGEQNEERLRR 164

  Fly   119 AEALNVSSELAVAQR----FYNACLGANLHPFNAADP-AYLSLIRSIGGFPAVDGDAWKASNFNW 178
            ..|.........|||    |:.:||  ::.......| ..|.:|...||:. :.|.|.:.....|
  Rat   165 LLARPTGGPGGAAQRKVRAFFRSCL--DMREIERLGPRPMLEVIEDCGGWD-LGGAADRPGAARW 226

  Fly   179 -INMSAHLAN--YGANGLIRETLQL------RYPF---EPYTKLPELGFDHIIVHEENISRNTTR 231
             :|...:.|.  |.|..|...|:.|      ||..   :....|||   ..:.:.::..|.....
  Rat   227 DLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPE---RTLYLAQDEESEKVLA 288

  Fly   232 AFRLNEERMHGYLRAFGLPED-----RIREAIAGVFAFWRDALEIPPQCEVFDPY------RIKR 285
            |:::..||:...|.|..:.:.     ::.:.:|.:.....|.|    :.:|...|      ::::
  Rat   289 AYKVFMERLLRLLGADAVEQKAQEILQLEQRLANISVSEYDDL----RRDVSSVYNKVTLGQLQK 349

  Fly   286 VFPQSEYYYNISWSGLHSTNKLFCDFYYVELDKVC--------------ARHRKAVANYLAMKLL 336
            :.|      ::.|..|  .:::|.:.:..|.:.|.              :..|:.:.|||..:::
  Rat   350 ITP------HLQWKWL--LDQIFQEDFSEEEEVVLLATDYMQQVSQLIRSTPRRILHNYLVWRVV 406

  Fly   337 YRFDPKLKAPRYQ---------------RNYCSVTLYQSMR---FLFNKLYMANNFSEAKRLEMS 383
            ......|..|..:               :....|.|.|:.|   .....|::..:||.|.:.::.
  Rat   407 VVLSEHLSPPFREALHELAKEMEGNDKPQELARVCLGQANRHFGMALGALFVHEHFSAASKAKVQ 471

  Fly   384 EMVRELRKSLRKALEDADWLDAESRARALLKESRIQPRIGSFQDDALSDRIIREINSLKVIEDRY 448
            ::|.:::..|.:.||:.||:||:::|.|..|...:...:| :.|..|....:.:....:|.|..|
  Rat   472 QLVEDIKYILGQRLEELDWMDAQTKAAARAKLQYMMVMVG-YPDFLLKPEAVDKEYEFEVHEKTY 535

  Fly   449 AETNINLQHLVVQINRFSSRHFQELTNDT---KPQKILTGLQVGAGYYTPD-NSINVMAGVVEPP 509
            .:..:|.....:|::....|  ||:...|   .||.:       ..||.|: |.:...||:::|.
  Rat   536 FKNILNSIRFSIQLSVKKIR--QEVDKSTWLLPPQAL-------NAYYLPNKNQMVFPAGILQPT 591

  Fly   510 IYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGNGHMESLLSEISQQALEDRAECYMDYYGK 574
            :|....|.||.:|.:|.|:||||.||:|.....:|.:|::....:|.|......:|||.:..|..
  Rat   592 LYDPDFPQSLNYGGIGTIIGHELTHGYDDWGGQYDRSGNLLHWWTEASYSRFLHKAECIVRLYDN 656

  Fly   575 YQVPEISRRVNGKTTLDENIADNSGLRQALTAYRSH-RQQLLEHPGQERISDAMPGLDLTPEQLF 638
            :.|  .::|||||.||.|||||..||:.|..||:.. |:...|||        :..|..|..|||
  Rat   657 FTV--YNQRVNGKHTLGENIADMGGLKLAYYAYQKWVREHGPEHP--------LHRLKYTHNQLF 711

  Fly   639 FLGFAQLFC-SHYEEEHYWKGLSDVHTFDQFRVLGVLSNSEDFFHAYNCSVGSGMRPGAKTCRLW 702
            |:.|||.:| ....:..|.:.|:|.|..:.:||||.:|..|:|..|::|...|.|.|..| |.:|
  Rat   712 FIAFAQNWCIKRRSQSIYLQVLTDKHAPEHYRVLGSVSQFEEFGRAFHCPKDSPMNPVHK-CSVW 775

  Fly   703  702
              Rat   776  775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:189000 178/700 (25%)
Ecel1NP_068544.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..51
M13 121..773 CDD:341056 178/700 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344512
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.