DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and Ece2

DIOPT Version :10

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:XP_038944493.2 Gene:Ece2 / 408243 RGDID:1303039 Length:789 Species:Rattus norvegicus


Alignment Length:734 Identity:182/734 - (24%)
Similarity:301/734 - (41%) Gaps:174/734 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HESLKLISLMLLWVIVAAVLTDCEARSLVDRSENSDSNGSSTNRSAAEYQLQEYAEFMKSYMNQS 67
            |..|:|: |..|.:::||:|..|.....|....:...:...|     |..::...:.::| :::.
  Rat   134 HTQLELV-LAGLILVLAALLLGCLVALWVQYHRDPVHSTCIT-----EACIRVAGKILES-LDRG 191

  Fly    68 VEPCENFYEYACGNY--RNVKPDRYSPGSRSNLGDVTY-TLIDITEQLLGRMDLAEALNVSSELA 129
            |.||::||:::||.:  ||..|   |..||.|    |: :|.|..:.:|..:......|.|||  
  Rat   192 VSPCQDFYQFSCGGWIRRNPLP---SGRSRWN----TFNSLWDQNQAILKHLLENSTFNSSSE-- 247

  Fly   130 VAQR----FYNAC--------LGA--------NLHPFNAADP----AYLSLIRSIGG-------F 163
             |:|    ||.:|        |||        .:..:|...|    .::.:::::.|       |
  Rat   248 -AERKTRSFYLSCLHLERIEKLGAKPLQDLIDKIGGWNITGPWDEDNFMEVLKAVAGTYRAAPFF 311

  Fly   164 PAVDGDAWKASNFNWINMSAH-----LANYGANGLIRETLQLRYPFEPYTKLPELGFDHIIVHEE 223
            ....|...|:||.|.|.:...     ..:|..|....|.:...|    ...:.|||   :::..:
  Rat   312 TVYVGADSKSSNSNIIQVDQSGLFLPSRDYYLNRTANEKVLAAY----LDYMVELG---MLLGGQ 369

  Fly   224 NISRNTTRAFRLNEERMHGYLRAFGLPEDRIREAIAGVFAFWRDALEIPPQCEVFDPYRIKRVFP 288
            ..|   |||.......:...|....:|:|:.|:                                
  Rat   370 PTS---TRAQMQQVLELEIQLATITVPQDQRRD-------------------------------- 399

  Fly   289 QSEYYYNISWSGLH----STNKL-FCDF-------------------YYVELDKVCARHRKAVA- 328
            :.:.|:.:|.|.|.    |.:.| |..|                   |..::.::..|...::. 
  Rat   400 EEKIYHKMSISELQTLAPSMDWLEFLSFLLSPLELGDSEPVVVYGTEYLQQVSELINRTEPSILN 464

  Fly   329 NYLAMKLL--------YRFD-------------PKLKAPRYQRNYCSVTLYQSMRFLFNKLYMAN 372
            |||...|:        .||:             .|...||:|.  |......::.|....|::..
  Rat   465 NYLIWNLVQKTTSSLDQRFETAQEKLLETLYGTKKSCTPRWQT--CISNTDDALGFALGSLFVKA 527

  Fly   373 NFSEAKRLEMSE-MVRELRKSLRKALEDADWLDAESRARALLKESRIQPRIGSFQDDALSDRIIR 436
            .|....: |::| |:.|:|.:..:.||:..|:|.::|..|..|...|...|| |.|..|..|.:.
  Rat   528 TFDRQSK-EIAEGMISEIRAAFEETLENLVWMDEKTRLAAKEKADAIYDMIG-FPDFILEPRELD 590

  Fly   437 EI-NSLKVIEDRYAETNINLQH-----LVVQINRFSSRHFQELTNDTKPQKILTGLQVGAGYYTP 495
            :: :..:|.||.:.:..:||.:     :..|:.:..||....:|..|          |.|.|...
  Rat   591 DVYDGYEVSEDSFFQNMLNLYNFSAKVMADQLRKPPSRDQWSMTPQT----------VNAYYLPT 645

  Fly   496 DNSINVMAGVVEPPIYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGNGHMESLLSEISQQA 560
            .|.|...||:::.|.|..:.|.:|.||.:|.::||||.|.||.....:|..|::.......|..|
  Rat   646 KNEIVFPAGILQAPFYAHNHPKALNFGGIGVVMGHELTHAFDDQGREYDQEGNLRPWWQNESLTA 710

  Fly   561 LEDRAECYMDYYGKYQVPEISRRVNGKTTLDENIADNSGLRQALTAYRSHRQQLLEHPGQERISD 625
            .::...|..:.|.:|||.  ..|:||..||.||||||.||:.|..||::   .|.:| |:|:   
  Rat   711 FQNHTACMEEQYNQYQVN--GERLNGLQTLGENIADNGGLKAAYNAYKA---WLRKH-GEEQ--- 766

  Fly   626 AMPGLDLTPEQLFFLGFAQ 644
            .:|.:.||..||||:||||
  Rat   767 PLPAVGLTNHQLFFVGFAQ 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:341056 169/669 (25%)
Ece2XP_038944493.2 None

Return to query results.
Submit another query.