DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and Nepl11

DIOPT Version :9

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_649449.1 Gene:Nepl11 / 40540 FlyBaseID:FBgn0037230 Length:592 Species:Drosophila melanogaster


Alignment Length:749 Identity:145/749 - (19%)
Similarity:254/749 - (33%) Gaps:223/749 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLMLLWVIVAAVLTDCEARSLVDRSENSDSNGSSTNRSAAEYQLQEYAEFMKSYMNQSVEPCENF 74
            :|.:||:...|...|...|                    .|.:|..::..::.|::.|.:||::|
  Fly     5 ALAVLWIAGIAYGQDDLLR--------------------VETELLSFSHNLEPYLDTSKQPCQDF 49

  Fly    75 YEYACGNYRNVKPDRYSPGSRSNLGDVTYTLIDITEQLLGRMDLAEALNVSSELAVAQRFYNAC- 138
            |.|.|.:..|:          |..|...:      :.||...|:|:.:::..:|.   .|:.:| 
  Fly    50 YGYVCSHSANL----------SETGRQRF------QSLLKETDVAQLMDMELQLI---NFFKSCE 95

  Fly   139 LGANLHPFNAADPAYLSLIRSIGGFPAVDGDAWKAS-----NFNWINMSAHLANYGANGLIRETL 198
            .|..:.....:     .|.|..||:|:::.:...||     ...|:.:..:....||        
  Fly    96 SGRGVEALKGS-----QLYRQSGGWPSLEPNKVNASQRTNQTQRWLGLLGYFHEVGA-------- 147

  Fly   199 QLRYPFEPYTKLPELGFDHIIVHEENISRNTTRAFRLNEERMHGYLRAFGLPEDRIREAIAGVFA 263
              .|.||....: :.....:::..:...|||.|.|   |:|:...|::||:.:.|.......|.:
  Fly   148 --PYFFETSVTM-QSNKRLVVLQPDGTRRNTLRKF---EQRVGEVLQSFGIEQSRAHVTALEVLS 206

  Fly   264 FWRDALEIPPQCEVFDPYR-----IKRVFPQSEYYYNISWSGLHSTNKLFCDFYYVEL------- 316
            ..|...:|.....|.|..:     .||:...:.....:.|.|           |:.:|       
  Fly   207 LERSRRDIVKADHVEDQVQFSYGNFKRIVFGNASLIRLDWDG-----------YFRKLLGGKTPQ 260

  Fly   317 --DKVCARHRKAVANYLAM-------KLL------YRFDPKLKAPRYQRNYCSVTLYQSMRFLFN 366
              |.:..:....:..|.|:       :||      |..| .:.|..:|               .:
  Fly   261 ASDTIVVKQLPRLVEYFALLQNTSMVRLLNWIWTDYLMD-IVDADCHQ---------------LS 309

  Fly   367 KLYMANNFSE------AKRLEMSEMVRELRKSLRKALEDADWLDAESR--ARALLKESRIQPRIG 423
            :.|..:.::.      |.|:|:::|..||.|:....|..:.|:|..||  :|..|.........|
  Fly   310 ETYAGDLYAHVVQRVTANRVELAQMYSELGKAYTDQLGGSVWIDEISRQSSRQFLGNIMHTTLNG 374

  Fly   424 SFQDDALSDRII-------REINSLKVIEDRYAETNINLQHLVVQINRFSSRHFQELTNDTKPQK 481
            ..:.||....|:       |.:..|:    ::..|.....|...|:.|:                
  Fly   375 DERLDAAYHSILLGRRSLYRNLEKLR----KFQRTRRLASHSAQQVRRY---------------- 419

  Fly   482 ILTGLQVGAGYYTPDNSINVMAGVVEPPIYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGN 546
                    |..:.|   :|...|       |.:|...|.:..||......|:....::.:    .
  Fly   420 --------AQMFAP---VNAFLG-------QHNLSTPLNYLLLGEFFSRSLVAAGSSSRT----Q 462

  Fly   547 GHMESLLSE----ISQQALEDRAECYMDYYGKYQVPEISRRVNGKTTLDENIADNSGLRQALTAY 607
            |...|..||    |.||.                   :.::.|....|...:|.    ||||:||
  Fly   463 GAWRSSDSERRFAIFQQC-------------------VGKQTNAIDLLLSLLAQ----RQALSAY 504

  Fly   608 RSHRQQLLEHPG-QERISD--AMPGLDLTPEQLFFLGFAQLFCSHYEEEHYWKGLSDVHTFDQFR 669
               .|.|....| .||:..  |.....::.::|||:....:.|.           |::....|.|
  Fly   505 ---GQWLATQAGLVERVDAVLAAGSSKMSLQRLFFVTSLLVDCR-----------SELGALQQDR 555

  Fly   670 VLGV----LSNSEDFFHAYNCSVGSGMRPGAKTC 699
            ...|    |.||.:|..|:.|..|..:.|..:.|
  Fly   556 KRQVTHATLRNSPEFLEAFRCRPGDVLYPQDQRC 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:189000 135/691 (20%)
Nepl11NP_649449.1 GluZincin 45..589 CDD:301352 134/687 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0016748
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.