DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl12 and Mme

DIOPT Version :10

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_036740.1 Gene:Mme / 24590 RGDID:3098 Length:750 Species:Rattus norvegicus


Alignment Length:800 Identity:191/800 - (23%)
Similarity:329/800 - (41%) Gaps:181/800 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LKLISLMLLWVIVAAVLTDCEARSLVDRSENSDSNGSSTNRSAAEYQLQEYAEFMKSYMNQSVEP 70
            :.|..|:||..|:|..:.     :|....::.....|...:|||.         :...|:.|.||
  Rat    29 ISLSVLVLLLTIIAVTMI-----ALYATYDDGICKSSDCIKSAAR---------LIQNMDASAEP 79

  Fly    71 CENFYEYACGNY--RNVKPDRYSPGSRSNLGDVTYTLIDITEQLLGRMDLAEALNVSSELAV--A 131
            |.:|::||||.:  |||.|:..|..|..::      |.|..|.:|  .|:.:.......:||  |
  Rat    80 CTDFFKYACGGWLKRNVIPETSSRYSNFDI------LRDELEVIL--KDVLQEPKTEDIVAVQKA 136

  Fly   132 QRFYNACLGANLHPFNAADPAYLSLIRSIGGFPAVD-------GDAWKASNFNWINMSAHLANYG 189
            :..|.:|:..:........| .|:|:..|.|:|...       |.:|.|..    :::...:.||
  Rat   137 KTLYRSCINESAIDSRGGQP-LLTLLPDIYGWPVASQNWEQTYGTSWTAEK----SIAQLNSKYG 196

  Fly   190 ANGLI---------RETLQLRYPFEPYTKLPELGF---------------DHII----------- 219
            ...||         ..|..:.:..:|...||...:               |.:|           
  Rat   197 KKVLINFFVGTDDKNSTQHIIHFDQPRLGLPSRDYYECTGIYKEACTAYVDFMISVARLIRQEQR 261

  Fly   220 --VHEENISRNTTRAFRLNEERMHGYLRAFGLPEDRIREAIAGVFAFWRDALEIPPQCEVFDPYR 282
              :.|..:|....:...|.:|    ...|...||||                        .||..
  Rat   262 LPIDENQLSLEMNKVMELEKE----IANATTKPEDR------------------------NDPML 298

  Fly   283 IKRVFPQSEYYYN---------ISWSGLHSTNKL----------------FCDFYYVELDKVCAR 322
            :......::...|         .|||..  ||::                :...|..:|..:..:
  Rat   299 LYNKMTLAKLQNNFSLEINGKPFSWSNF--TNEIMSTVNINIQNEEEVVVYAPEYLTKLKPILTK 361

  Fly   323 HR-KAVANYLAMKLLYRFDPKLKAPRYQRNY-----------------------CSVTLYQSMRF 363
            :. :.:.|.::.:.:......|     .|||                       |:..:..:|..
  Rat   362 YSPRDLQNLMSWRFIMDLVSSL-----SRNYKESRNAFRKALYGTTSETATWRRCANYVNGNMEN 421

  Fly   364 LFNKLYMANNFSEAKRLEMSEMVRELRKSLRKALEDADWLDAESRARALLKESRIQPRIGSFQDD 428
            ...:||:...|:...:..:.:::.::|:...:.|:|..|:|||::.:|..|...|:.||| :.||
  Rat   422 AVGRLYVEAAFAGESKHVVEDLIAQIREVFIQTLDDLTWMDAETKKKAEEKALAIKERIG-YPDD 485

  Fly   429 ALS--DRIIREINSLKVIEDRYAETNINLQHLVVQINRFS-SRHFQELTNDTKPQKILTGLQVGA 490
            .:|  :::..|...|...|:.|.|.       ::|..:|| |:..::|.......:.::|..|..
  Rat   486 IISNENKLNNEYLELNYKEEEYFEN-------IIQNLKFSQSKQLKKLREKVDKDEWISGAAVVN 543

  Fly   491 GYYTPD-NSINVMAGVVEPPIYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGNGHMESLLS 554
            .:|:.. |.|...||:::||.:......||.:|.:|.::|||:.||||.....|:.:|.:....:
  Rat   544 AFYSSGRNQIVFPAGILQPPFFSARQSNSLNYGGIGMVIGHEITHGFDDNGRNFNKDGDLVDWWT 608

  Fly   555 EISQQALEDRAECYMDYYGKYQVPEI-SRRVNGKTTLDENIADNSGLRQALTAYRSHRQQLLEHP 618
            :.|....:|:::|.:..||.:..... .:.:||..||.||||||.|:.||..||    |..::..
  Rat   609 QQSANNFKDQSQCMVYQYGNFTWDLAGGQHLNGINTLGENIADNGGIGQAYRAY----QNYVKKN 669

  Fly   619 GQERISDAMPGLDLTPEQLFFLGFAQLFCSHYEEEHYWKGL-SDVHTFDQFRVLGVLSNSEDFFH 682
            |:|::   :|||||..:|||||.|||::|..|..|:....: :|||:...||::|.|.||.:|..
  Rat   670 GEEKL---LPGLDLNHKQLFFLNFAQVWCGTYRPEYAVNSIKTDVHSPGNFRIIGTLQNSAEFAD 731

  Fly   683 AYNCSVGSGMRPGAKTCRLW 702
            |::|...|.|.|..| ||:|
  Rat   732 AFHCRKNSYMNPERK-CRVW 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:341056 175/734 (24%)
MmeNP_036740.1 Stop-transfer sequence. /evidence=ECO:0000255 16..23
M13 79..748 CDD:341056 174/732 (24%)
Blue background indicates that the domain is not in the aligned region.

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