DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and nep-5

DIOPT Version :10

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_001364754.1 Gene:nep-5 / 173933 WormBaseID:WBGene00017393 Length:694 Species:Caenorhabditis elegans


Alignment Length:696 Identity:129/696 - (18%)
Similarity:244/696 - (35%) Gaps:167/696 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 EYAEFMKSYMNQSVEPCENFYEYACGNYRNVKPDRYSPGSRSNLGDVTYTLIDITEQLLGRMDLA 119
            :|:..:...|:.||.|||||:.:.|..:...|.|                    .|:|:..:::.
 Worm   115 KYSAELLELMDSSVNPCENFHHHVCNGFNPRKKD--------------------FERLMKLINIQ 159

  Fly   120 EALNVSSELAVAQRFYNACLGANLHPFNAADPAYLSLIRSIGGFPAV--DGDAWKASNFNWINMS 182
            |..:....:.|.:|..:.|.......           |..:|...::  .|..:...|.:|...|
 Worm   160 EKPDHRKAVNVVRRMLSKCAMGKTEE-----------IHQVGRLSSIILPGLPFPLLNNSWTKPS 213

  Fly   183 AHLANYGANGLIRETLQLRYPFEPYTKLPELGFDHIIVHEEN------ISRNTTRAFRL------ 235
            ..::...:      :....|||  .||:    ..|||:|..:      |..::...|.|      
 Worm   214 DPISTSNS------STTYSYPF--LTKI----LAHIILHNPDDAGFVGIKPSSDSEFSLFVVKPF 266

  Fly   236 -------NEERMHGYLRAFGLPEDRIREAIAGVFAFWR------------DALEIPPQCEVFDPY 281
                   ....|:..|:. ..||......|...|...|            :.:|.....||.:..
 Worm   267 SPVLTNFKFRNMYDILKR-NAPESSTNGMIDLEFDRQRQLNDVIKLQTKLEKIEFKADPEVVNLT 330

  Fly   282 RIKRVFPQSEYYYNISWSGL----------HSTNKL--FCDFYYVELDK-VCARHRKAVANYLAM 333
            .|:|..|      .|.|..|          |...|:  |...||.|::. :.:...:.:.|:|.:
 Worm   331 EIQRQMP------IIDWKRLIDSWIPNGYAHLKEKVYGFNTSYYEEINAIISSTPSETIYNFLFL 389

  Fly   334 KLLYRFDPKLKAPRYQRNYCSVTLYQSMRFLFNKLYM-ANNFSEAKRLEMSEMVRELRKSLRKAL 397
            :..::| .:.:......:.|   |:|....:..|:.: .:...||..| ::.|:..::..|:::|
 Worm   390 RFSFKF-LRTEVASDLEDTC---LHQLSTTIPGKIVLYGSEEPEALNL-LNGMLHTIKDQLKRSL 449

  Fly   398 EDADWLDAESRARALLKESRIQPRIGSFQDDALSDRIIREINSLKVIEDRYAETNINLQHLVVQI 462
            ....|:|:.....|..|.::.:...| |..:.|.|.::.:|..    |..|..|   ||::::..
 Worm   450 ATLKWMDSRGIEEAQKKFNKTKTVFG-FTGEDLIDELVGKITP----ESNYIST---LQNVLLWQ 506

  Fly   463 NRFSSRHFQELTNDTKPQKILTGLQVGAGYYTPDNSINVMAGVVEPPIYQRHLPISLKFGTLGFI 527
            .|       .:........:...|.....|....|.|.:...::..|....:||....|.|:...
 Worm   507 TR-------NMFKSVAENNVTVFLNSEVFYSVEKNEITISRALLHYPFMSANLPNYTNFATIASK 564

  Fly   528 VGHELIHGFDTTSSYFDGNGHMESLLSEISQQALEDRAECYMDYYGKYQVPEISRRVNGKTTLDE 592
            :..::||.||....::|.:|:..:..:..:::..:...:|:                      |.
 Worm   565 ILPQMIHIFDERGRFYDSDGNHRNWWNTETERYFQIIVQCF----------------------DG 607

  Fly   593 NIADNSGLRQAL--TAYRSHRQQLLEHPGQERISDAMPGLDLTPEQLFFLGFAQLFCSHYEEEHY 655
            .:.:..|:..::  .||.|.::.....||.::.||         |.|||....:..|        
 Worm   608 MMQNVFGVSVSIGWNAYDSTKEPYATLPGIQQSSD---------EALFFYSMVKTMC-------- 655

  Fly   656 WKGLSDVHTFDQFRVLGVLSNSEDFFHAYNCSVGSGMRPGAKTCRL 701
                    |.|...|...|::...|..|:.|:.|:.|.|..| |:|
 Worm   656 --------TSDPDNVNEALASVPQFNSAFKCNNGTKMNPPTK-CKL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:341056 124/680 (18%)
nep-5NP_001364754.1 GluZincin 128..691 CDD:472708 124/680 (18%)

Return to query results.
Submit another query.