DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and nep-3

DIOPT Version :10

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:732 Identity:156/732 - (21%)
Similarity:272/732 - (37%) Gaps:150/732 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LISLMLLWVIVAAVLTDCEARSLVDRSENSDSNGSSTNRSAAEYQLQEYAEF------MKSYMNQ 66
            :|.|.:..:::..::...||..:......:.||.|:::.|.....:....|.      :.::.:.
 Worm    16 IIILAVPIIVILPLVLLLEAGKIGGEVSENCSNHSTSSASPKPKPMCLTPECITLVHQLLNFQDP 80

  Fly    67 SVEPCENFYEYACGNY--RNVKPDRYSPGSRSNLGDVTYTLIDITEQLLGRMDLAEALNVSSELA 129
            ||:||||||:.|||.|  .||     ..|||      |.....|.::|:.........:.|....
 Worm    81 SVDPCENFYQAACGKYNEHNV-----IDGSR------TAQKQQIVKRLIRDFLHKNQSSTSKSEN 134

  Fly   130 VAQRFYNACLGAN----LHPFNAADPAYLSLIRSIGGFPAVDGDAWKASNFNWINMSAHLANYGA 190
            ..:..|..|..|.    |...|.....::: |:.||.:|.:| :.|....||...|...|...|.
 Worm   135 SMKLLYEKCKEAKTIKVLGNQNLLQEIFMN-IQKIGSWPVLD-ENWDGKKFNLNEMLLSLIRLGV 197

  Fly   191 NGLIRETLQLRYPFEPYTKLPELGFDHIIVH---------------EENISRNTTRAFRLNEERM 240
            :                    ..||..||:.               .||:|...::.|..|    
 Worm   198 S--------------------NFGFFEIIISSDAFVEIKPARNFPTRENLSDIISKVFLGN---- 238

  Fly   241 HGYLRAFGLPEDRIREAIAGVFAFWRDALEIPPQCEVFDPYRIKRVFPQSEYYYNISWSGLHSTN 305
             |:.......|:.:||                                    |.|:. ..|.|..
 Worm   239 -GFQPNITAIENDLRE------------------------------------YENLQ-RELKSLE 265

  Fly   306 KLFCDFYYVELDKVCARHRKAVANYLAMKLLYRFDPKLKAPRYQRNYCSVTLYQSMRFLFNKLYM 370
            :|           :.....:::.|||...  |.....|:..|.....|...:...:.....::::
 Worm   266 RL-----------IQTTPNRSLVNYLIFN--YLKSVMLEYKRLPEEQCEGVVIDFLPRASTRVFV 317

  Fly   371 ANNFSEAKRLEMSEMVRELRKSLRKALEDADWLDAESRARALLKESRIQPRIG---SFQDDALSD 432
            .|...:..|..::.|:.:::......::::.||:.||:..|:.|...|:..||   .|:.....|
 Worm   318 QNFLDKENRKYVAGMIEDVKMGFIDMIQESTWLNEESKKVAVQKVKNIKSMIGYPDFFEPPGTLD 382

  Fly   433 RIIREINSLKVIE--DRYAETNINLQHLVV-QINRFSSRHFQELTNDTKP----QKILTGLQVGA 490
            |..:::|    ||  |.|        |.:| :|.:|::....|......|    |.||.    ..
 Worm   383 RSFKDLN----IEQTDSY--------HTIVRKIQKFTNEQCMEFVASEIPLDPRQPILH----AN 431

  Fly   491 GYYTPDNSINVMAGVVEPPIYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGNGHMESLLSE 555
            .:|...|.:.::|.|::.||:....|..:....:|.::.||:.|.||.|...:|..|.....|:.
 Worm   432 AFYQNTNFLAILAPVLDDPIFDTTFPRYVNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTP 496

  Fly   556 ISQQALEDRAECYMDYYGKYQVPEISRRVNGKTTLDENIADNSGLRQALTAYRSHRQQLLEHPGQ 620
            ...:....|..|.:..:.:|..|:..|.:||..||.|..||..|:.   .|:|:.::..|.:.  
 Worm   497 EDSEEYGKRLRCLLRQHDEYDDPDFGRNLNGSKTLHEISADRFGVE---AAWRTFKKLDLSNE-- 556

  Fly   621 ERISDAMPGLDLTPEQLFFLGFAQLFCSHYEEEHYWKGLSDVHTFDQFRVLGVLSNSEDFFHAYN 685
               |:.:...:...:||:|...|.::|...:.......|...|..:.|||.|:.:|...|...:|
 Worm   557 ---SEIVGFQNFNIDQLYFRTAALIWCRQRDTTDLQYALQREHPTNNFRVNGIYANMPQFAETFN 618

  Fly   686 CSVGSGMRPGAKTCRLW 702
            |.:||.|.| .|.|.|:
 Worm   619 CPLGSPMNP-KKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:341056 144/662 (22%)
nep-3NP_494679.2 M13 82..631 CDD:341056 144/661 (22%)

Return to query results.
Submit another query.