DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl12 and nep-11

DIOPT Version :9

Sequence 1:NP_649924.1 Gene:Nepl12 / 41172 FlyBaseID:FBgn0037727 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_494538.1 Gene:nep-11 / 173685 WormBaseID:WBGene00017557 Length:848 Species:Caenorhabditis elegans


Alignment Length:727 Identity:177/727 - (24%)
Similarity:311/727 - (42%) Gaps:143/727 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 MNQSVEPCENFYEYACGNYRNVKPDRYSPGSRSNLGDVTYTLIDITEQLLGRMDLAEALNVSSEL 128
            ||.||:||::|:|:|||.:.:..|   .|......|...|....:.:||...:: .|.:..|..:
 Worm   177 MNTSVDPCDDFFEFACGQWNDQHP---IPDDMYGFGTFAYAREQVRQQLRVLLE-QEVVTESESI 237

  Fly   129 AVAQRFYNACLGANLHPFNAADPAYLSLIRSIGGFPAVDGDAWKASNFNWINMSAHLAN----YG 189
            .:|:..|.:|:...........|.:.:| ..:|.:|.:. :.|..:.||:.::   |.|    ||
 Worm   238 NMARATYRSCMNKTQLDELMTGPLFETL-TELGEWPLLQ-ENWDKTKFNFTSL---LVNSRRDYG 297

  Fly   190 ANGLIRETLQLRYPFEPYTKLPELGFDHIIVHEENISRNT-------------TRAFRLNEERMH 241
            .:..          |:.|          |....:|.||||             ||.:.||.....
 Worm   298 VDVF----------FQLY----------IYADSKNTSRNTLFIDQSTLALGRGTRDYYLNTTLFS 342

  Fly   242 GYLRAF-----------------GLPEDRIREAIAGVFAF-------------WRDALEIPPQCE 276
            .::.|:                 ...|..:...|..:..|             .|:...:..:.:
 Worm   343 SHMTAYRKYLRQIAHLLKTDGNLTRSESEMNADIEKIIDFEIELAKIIVAEDERRNNTRLYNKRQ 407

  Fly   277 VFDPYRIKRVFPQSE---YYYNISWSGL-----HSTNKLFCDFYYVE-----LDKVCARHRKAVA 328
            :.|.|.:   .||.:   ::.:|:.|.|     :.|..:.|:..|::     ::|...   ..:.
 Worm   408 IQDLYNL---LPQVDWVPFFQSIAPSDLTHLFHNETEIIICEIEYLQHVSELIEKTDV---GLLT 466

  Fly   329 NYLAMKLLY--------RFD------------PKLKAPRYQRNYCSVTLYQSMRFLFNKLYMANN 373
            ||:..:::.        ||:            .:...||::.  |:......:......:|:..:
 Worm   467 NYVLWRVVQSNVRYLDERFEDIKQDFLKVMTGQQQSPPRWKD--CAQVPSTVLPLAAGAIYVQAH 529

  Fly   374 FSEAKRLEMSEMVRELRKSLRKALEDADWLDAESRARALLKESRIQPRIGSFQDDALSDRIIREI 438
            |.|:.:.|...|:..||.|....:...||:|.|::|.|:.|.:.:...|| :.|         ..
 Worm   530 FQESDKHEALRMIMHLRNSFADLVRQNDWMDEETKAVAIEKANSMINNIG-YPD---------VT 584

  Fly   439 NSLKVIEDRYAETNINLQHLVVQINRFS-----SRHFQELTNDTKPQKILTGLQVGAGYYTPD-N 497
            |.|..::.:|...:|:.......|.:.|     ||.||:||......:......|...:|:|: |
 Worm   585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFDKHEFDISPAVVNAFYSPEKN 649

  Fly   498 SINVMAGVVEPPIYQRHLPISLKFGTLGFIVGHELIHGFDTTSSYFDGNGHMESLLSEISQQALE 562
            :|...||:::||.:....|.::.:|.:|.::|||:.||||...|.:|.:|::.:..||.|..:.:
 Worm   650 AITFPAGILQPPFFSGTFPKAVNYGAIGAVIGHEITHGFDDQGSQYDKDGNLHNWWSESSLNSFD 714

  Fly   563 DRAECYMDYYGKYQVPEISRRVNGKTTLDENIADNSGLRQALTAYRSHRQQLLEHPGQERISDAM 627
            .|..|.::.||.|.||:.:.|||||.|..||||||.|:::|..||:.:..:..|.|       .:
 Worm   715 TRRRCIVEQYGNYTVPKTNFRVNGKLTQGENIADNGGVKEAFQAYQKYVTENGEEP-------RL 772

  Fly   628 PGL-DLTPEQLFFLGFAQLFCSHYEEEHYWKG-LSDVHTFDQFRVLGVLSNSEDFFHAYNCSVGS 690
            ||| ..|.||:||:.:|..:|...:|....:. |:|.|:.:.|||:|||||.:.|...|.|...:
 Worm   773 PGLQQYTNEQIFFVSYAHFWCGKKKEAAAMQQVLTDEHSPEVFRVIGVLSNMQAFADVYKCPRNA 837

  Fly   691 GMRPGAKTCRLW 702
            .:.|..| |.:|
 Worm   838 PVNPDHK-CIVW 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl12NP_649924.1 M13 68..700 CDD:189000 172/719 (24%)
nep-11NP_494538.1 PepO 174..848 CDD:226118 176/725 (24%)
M13 181..845 CDD:189000 172/718 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.