DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9492 and dhc-4

DIOPT Version :9

Sequence 1:NP_001287256.1 Gene:CG9492 / 41171 FlyBaseID:FBgn0037726 Length:4724 Species:Drosophila melanogaster
Sequence 2:NP_001338793.1 Gene:dhc-4 / 189209 WormBaseID:WBGene00012272 Length:2727 Species:Caenorhabditis elegans


Alignment Length:3083 Identity:556/3083 - (18%)
Similarity:1006/3083 - (32%) Gaps:1044/3083 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1190 IQTYIK--RWKPYHF----------LWKNDRTTRQLME-------------FGLQEFET----TL 1225
            ||.|:|  |.||...          ||.|....|.|::             ...::.||    .:
 Worm   258 IQAYLKTLRNKPAFLSIDCMIVDRKLWVNSEQIRLLLKEPISVMCALENVRMSTEDCETWQEEAM 322

  Fly  1226 RCLSDLDANLLV-EPDMEVFG---------------QCVAVYNEKLK----------------YG 1258
            .|:..|...|:| .|.::.:.               :.:.:|::...                :.
 Worm   323 ICVEVLSHELIVHHPFIQPYAFLIDDYKVSPKLTEEELIKMYDDSTHLQIRLTKAVKLLTIRCFV 387

  Fly  1259 LAIE---------IKSCNHKIGQAMKKKYKKEMDYVYAVINEM---DRKLDRPI--RDLDDVRMI 1309
            |.:|         |:|..:::..|:::|:.       .::|::   .||.||.:  |.:|...|:
 Worm   388 LRLESVWSEVDRRIRSFRNQLKMAIRRKFT-------TLLNKLLHDFRKYDRALQYRSIDPSMML 445

  Fly  1310 METLGKIREQEVDMELR----------IDPIEEAFNVLTRYEVQVEREQFDLVDNLRAT------ 1358
            .      .:.:||:.|:          ::..::.|.: |:: :.::..|.|.:..|.:.      
 Worm   446 S------NKAQVDLMLQNEIGDSVRQFVEVYDKVFEI-TQH-ISLDTSQLDTLLQLASLRLSLPQ 502

  Fly  1359 --------FQNLLAGALQAQVKLLDMQPAFQDDLRTNLDNFK--------QDKISYVTEYRTAGP 1407
                    ||..::..|....|   .|.....:::..::..|        |:..:|:|:.....|
 Worm   503 CINDHAHFFQKRISTFLHFVTK---KQSKVMSNVQKAMEKLKIVQTMGNPQEVDNYLTQMAKLRP 564

  Fly  1408 MQAGLTPREASDRLILFQNRFEGMWRRLQTYQSGEELFGLPQTDYPELGQIRKELNLLQKLYKLY 1472
            |...|. .|..|     .|:|             |....:..:|..::.....|:..||.|::..
 Worm   565 MLDNLI-TEIED-----LNKF-------------ETAVDIQVSDVTKMRHFVGEIGSLQSLFEAT 610

  Fly  1473 NDVIDRVSSYYDIPWNEVDIEEINNELMEFQNRCRKLPKGL------KEWPAFHALKKTIDDFND 1531
            :.....|:::::.....|:|:...|.:.:|..:.......|      |.:.|:  .:..:|.|..
 Worm   611 SGYYKHVNAFFESRRTLVNIDASRNFIDQFTIQLSIFESSLTTHRAAKHFIAY--ARNEVDAFKK 673

  Fly  1532 MCPLLELMANKAMKPRHWQRI-----MDVTRYIFEFDSEGFSLKNILEAPLLKHKEDIEDICISA 1591
            ...:.|:|:.:.:...||.|:     .|:|.|      ...|:..|.|..|..|.:.::.|..||
 Worm   674 NFAVAEVMSCRRLLDAHWLRMSEIVGFDLTPY------ANSSIAQICELGLEAHLQQLKPIAFSA 732

  Fly  1592 MKEKDIEAKLKQVTNEWSVHELQFMSF--------NNRGELLLRGDTTAETIGQL-------EDS 1641
            .:|.....:|..:...||...|:...:        ....||..|......|:..:       :||
 Worm   733 EREATAADQLHAIVTFWSQEPLEMRCYVQWKLSLALKLSELHHRVQNDINTLKHMTNVEQITDDS 797

  Fly  1642 LMVLGSLLSNRYNAPFRKQIQQWVYDLSNSNEILERWLLVQNMWVYLEAVFVGGDIAKQLPKE-- 1704
            |                   .||:...:.:.:||:.|...|..|:.:..:||  .....|.||  
 Worm   798 L-------------------PQWIEWTARAEKILKAWCETQQKWMRVANIFV--TCRDTLQKEYE 841

  Fly  1705 -----AKRFSKI------DKSWQKIMQRAHETPGVVACCVGDDLLKQLLPHL-------QEQLEI 1751
                 ||.|.||      |::..::||                     ||||       ...:.|
 Worm   842 LLRTCAKYFIKIERNVLKDETIYRVMQ---------------------LPHLPCWIQKINSMVSI 885

  Fly  1752 CQKSLSGYLERKRMMFPRFFFVSDPALLEILGQASDSHTIQNHLLNIFDNTKSVKFHDVEYNKMM 1816
            ..:.:.|.|:..||...|....|:.                 ||||:|..|              
 Worm   886 IIQGVRGLLDGMRMNNARLCLSSEV-----------------HLLNLFSTT-------------- 919

  Fly  1817 AIISSEGEMIQLDRAIRAEGSVETWLTQLLVTAQASLHSIIRTAYATINDPNFTLLSFLEKAPAQ 1881
                                |:||.|..||.....||                            
 Worm   920 --------------------SIETRLKLLLKDCFPSL---------------------------- 936

  Fly  1882 IGLLGIQMVWTRDAEMALMRGRERKVMMETNNKFLEMLNTLIDQTTRNLTKRE------------ 1934
                                   |::.....|: |||::.|.::.|.:|||.|            
 Worm   937 -----------------------RRLCFNRRNQ-LEMVDLLEEKVTVDLTKSEIESQEPCELIRS 977

  Fly  1935 -RTNFETLIT--IHVHQRDIFDILCRMNIKSANDFEWLKQCRFYFKEDLDKTWI---------SV 1987
             ...|.:.:|  |...::|......|:....|...|..:.....|...::||:.         |:
 Worm   978 IEQAFASKLTDIITYERQDRSKAASRVGANVAELIETRQTLDPLFLSRVEKTYYIQHRSVQRQSL 1042

  Fly  1988 TDVTFTYQNEYLGCTDRLVITPLTDRCYITLAQALTLSMGGAPCGPAGTGKTETVKDMGKTLAKY 2052
            ..|.|.|..|    .:|.:...|.|    :.:....:.:.|..|     .....|..:...:...
 Worm  1043 LTVDFVYSTE----INRFIPRSLAD----SWSSGHIVLLIGEMC-----STRSFVLRLANCMCSN 1094

  Fly  2053 VVVFNCSDQMDYRGLGRIYKGLAQSGSWGCFDEFNRIEL-------PVLSVAAQQVAVVLTAKKE 2110
            :.:.|....::...|.|:.||:|.| ||  |.....::|       .:..:.|.||.       .
 Worm  1095 LRIVNSHQLLEPAFLERVTKGIAMS-SW--FVLLENVDLLDSQLIFKLFKILASQVT-------S 1149

  Fly  2111 KRKTFLFTDGDTIEMNPEFGIFITMNPGYAGRKELPENLKIQFRTVAMMVPDRQIIIRVKLASCG 2175
            ..:.||   ..|.|:                :.:||.|:.::...|                   
 Worm  1150 FPRLFL---SSTDEI----------------KNQLPTNIAVEHLGV------------------- 1176

  Fly  2176 FLE--NITLARKFYTLYKLCEEQLTKQVHYDFGLRNILSVLRTLGAAK--------RRNSKDTES 2230
            |.|  .::.|.||.|                    :.||.:||....|        .:......|
 Worm  1177 FHEFVEVSPAFKFET--------------------SPLSSVRTSSIPKLPAQLVSTGQPPSSPHS 1221

  Fly  2231 TIVMRV---LRDMNLSKLIDDDEPLFMSLVSDLFPNQTLEKT--NYPELEAAILQQTDEASLVYH 2290
            .::.::   :|:..:|..:..            ...:||::|  |:||                 
 Worm  1222 VLLEKIGAKIRNREISGCVGS------------LAKETLKETLQNFPE----------------- 1257

  Fly  2291 PPWVLKLIQLYETQHVRHGIMTLGPSGAGKTTCI--HTLMKAMTQMGDNHREMRMNPKAITAAQM 2353
                 |:|.:|....||..::|.....|...:.|  ..|..|.|..|.:..|...:....|::..
 Worm  1258 -----KIIWVYTDVFVRDQMVTRSDEFAATQSGILFEVLSPATTGNGGSDSERSYHSTISTSSVT 1317

  Fly  2354 FGRLDV---ATNDWT------------DGIFSALWRKTLKLKAGEHVWLVLDGPVDSIWIENLNS 2403
            ...:.|   .:..|.            || :||.....|.|..|...|     |.::  ::.|..
 Worm  1318 INTIVVFYGFSEFWNIFPFISPLFLKKDG-YSAQTPPFLTLDDGSTYW-----PQEN--VQFLMC 1374

  Fly  2404 VLDDNKTLTLANGDRLTMAPTVKIIFEPHNIDNAS-PATVSRNGMVYMSSSGLDSRPIVQAWLKN 2467
            :.|:       .|..|.   |||....|.::.|.: ...|:|:..              :.|.|.
 Worm  1375 IPDE-------EGFHLN---TVKKFDIPFHVVNENLKMDVARSWR--------------KVWHKK 1415

  Fly  2468 RAPGEKSTFSDLFDQ-TFVEVYNWGVQMVKLQMP-------VLQCNIVQQMLFILEGLIPVKK-- 2522
                    :::||:: :.||:.:..|..:...|.       :....:.|.:...|..:||..:  
 Worm  1416 --------YTELFNKISLVEIMDELVDRILSPMASHFKSTFLWPSTLFQVIYHDLTEVIPTSRIT 1472

  Fly  2523 --EDEQAVSMSSKESHDANKRLEHQKHVEEARRQSIGSQIVEDLPPETSIEEKEDTCTPEHLHRL 2585
              .|...:::....::..:...:.|..||:...:::|: |.|.|    ||:..:|.|.       
 Worm  1473 SVNDTLRITVVLATANFISIFADDQGKVEKYMGRALGA-IREKL----SIQMPDDICN------- 1525

  Fly  2586 YIFALAWGLGGYLSTSDRQRMNLFVKESFPQLDYPKGSAHENTIFDFFVSP---AGVWQSWKTLV 2647
                  |    .:|..|..::..:..|.|.|....|.||..|.:   .|:|   ..::.|.:.|.
 Worm  1526 ------W----KISYQDATKLVRWEDEPFCQSSIDKDSAIGNIM---IVTPNMDRLLFYSIRLLA 1577

  Fly  2648 T---------PYMYPELSTPDYLSILVPIVDNVRIDYLIGTIANQERAVMVIGEQGTGKTVIMKN 2703
            :         ||....:........|...|.::.:::|           .:.|:...|..|..|.
 Worm  1578 SGHNILVHGPPYSRKTMFVKMISKFLSSTVGDLTVEFL-----------WLDGKSRVGNDVAQKK 1631

  Fly  2704 FMKKMNVESYMGRS---------FNFSSATSPYQFQRTIESYVEKRV----GVTFGPPGGRKLIV 2755
            |...:.......:|         |:|:....|     .||.:|:.:.    |.........::|:
 Worm  1632 FADVVGTCERAHQSKQLYIVIDRFSFTEPLLP-----IIEFFVDHKTYWKDGKLCNSDAQIRMII 1691

  Fly  2756 FIDD------------------INLPEINEWGDQ--ITNEIVRQSMDMKGFYS-----LEKPGDF 2795
            ..|:                  |.:|...::.||  :...::..:...|.|.|     ||   .|
 Worm  1692 ITDEEDYAWLHKTKALASTFVGIAMPASTKFKDQKPLVQSLIAANFTAKSFSSEYHHILE---SF 1753

  Fly  2796 TT-IVD------VQYVAAMGLPGGGRNDIPSRL-KRQFCVFNCNIPDNDSIDKIF-----RVIGE 2847
            :: ||:      |:.:::|.|        .:|| |..|..|..|.||.|::.::|     ||||:
 Worm  1754 SSCIVEIVRKPYVENLSSMAL--------ATRLAKSFFFAFPDNCPDPDALLRLFIHESARVIGD 1810

  Fly  2848 GHYNAKRGFVPEIRSLVKKLIVVTRHLWQRTREKLLPTPAKFHYVFSLRDLSRIWQGMVGTLSTV 2912
            .        :..|                                                    
 Worm  1811 A--------IDPI---------------------------------------------------- 1815

  Fly  2913 ITSESVLMALWKHECTRVFADRFTTFQDKEWFGSELACLVREELGDSHSQMILPNPVFVDFMRDA 2977
                        |..|  ||.:|.|..|:.:                       |..|...::..
 Worm  1816 ------------HRAT--FAQQFETLIDENF-----------------------NTAFQAILKHI 1843

  Fly  2978 PEPTGEEGEDTDME---------LPKVYEPVHSHEV---LRERLVMFLAQFNEMV--------RG 3022
            .:.:.||.|:..:|         ...:|..|.:|:|   |....|:...||...:        |.
 Worm  1844 AQISEEEEEEEGVEKRMTASLDMFDLIYSEVDAHDVVDGLAYEPVVDRVQFQRSIENFLFEHHRN 1908

  Fly  3023 SGMDLV-FFPD--AMLHLVKISRIIRHPRGSVMLVGVGGSGKQSLTKLASFIAG----------- 3073
            ...|.| .|.|  ....:.::.|:||.....::|.....||:..:.|.|.....           
 Worm  1909 HTKDRVRLFVDWETSGWVQRVMRVIRQASEHMVLTAPPNSGRTQVVKAACVACNATMMHMQVDAT 1973

  Fly  3074 -YKTF----QIALTRSYN-VAN---------------------FLEDLKLLYRTCGVQGKGTTFL 3111
             |.||    :.||:|:.| :||                     ::|.:||     .::...|..|
 Worm  1974 CYDTFISRWEYALSRAINIIANTNQHVVILVHLDFCYEKVEPRWMEQIKL-----WIECPNTQHL 2033

  Fly  3112 FTDMDIKEEG--FLEYLNNILSSGVISNLFSRDEQAEIV------QELTPVMKRENQRKTATPES 3168
            .:|..:...|  .:|...|:.:            |.:.:      |.:...:..|..::   |::
 Worm  2034 VSDEQLHTMGEQLIECEKNLAT------------QMQTIGLRLPGQRMCKYLPVETLKE---PQA 2083

  Fly  3169 VMDFFLARTCTNLHVAFCFSPVGETFRSRVQRFPALVSGCTIDWLHPWPKDALVSVARHFLSHFE 3233
            :.....||....|||.|...|          :|....|.|||..:....|..|:|.....:|..:
 Worm  2084 LRKVLEARIFDALHVMFLVDP----------QFKTDFSWCTIFHVPTIEKSELLSKVSKIISDCK 2138

  Fly  3234 IECTPAVKEELVNALGSIQDIVAETSQEYFQRFRRATHVTPKSYLNFIAG-YKNIYQMKQQEL-R 3296
            :       :|....:.|...||    ::|.|....|.:.|..|.|..:|. ::.:::.:::|| .
 Worm  2139 V-------DEAAQIIVSTFFIV----KKYLQSIGIALYGTVFSQLFEVADCFQIVFREQKKELVA 2192

  Fly  3297 DGV---EKMDT--GLEKLKEASASVEILKKDLVVMEEELVEASKNAE--------SVLVE-VTER 3347
            :|.   |.:.|  .:|||.|....|:|......::|:|.:.:..|.|        .||.| |..:
 Worm  2193 EGTRLNEALHTCEQIEKLAEMGKEVDIEAVQRRIVEKETMLSKMNRERNTKGARMEVLSELVAVK 2257

  Fly  3348 AMQAEIVKNQVLIVKDKAEALVACIAHEKALAEEKLEAAKPALEEAENALNTIKPAHIATVRKLG 3412
            |...|.::.:...:|...||:|:.          ..|..:..:||.....||    .|.|:.|:.
 Worm  2258 ATNLETMRAEEAALKTTVEAMVSA----------PQEEFRKCVEELLKFSNT----DIKTLSKIT 2308

  Fly  3413 RPPHLIMRIMDCVLIL-------FKRKLHPCIPDAGTPCPKPSWQESLKMMASATFLLQLQNYPK 3470
            :|.   :.|..|..:|       ||.|.|..          .:|.||||.::...|.::|.....
 Worm  2309 KPS---VGIRLCCEMLRTIFEPNFKPKRHAA----------EAWTESLKFVSDKAFFIKLATCDA 2360

  Fly  3471 DTINDEMIDLLQPYFRMEDYNMDMARR---VCGDVAGLLSWTKAMSFFHSVNKEVLPLKANLTMQ 3532
            |.:..:.:.:|:.|....::|.:....   ||   |.|..|..|.          |.|...|.:.
 Worm  2361 DILTVDQMKVLKKYVDRAEFNANKIEHESVVC---ACLCRWIGAF----------LELACTLRVM 2412

  Fly  3533 EARLKLAMDDLAGAEEQLREREEALQAVKDQYDKAVGEKQRL---TDAANVCLRKMTAATA---- 3590
            |.::           |:.:|..|.::..:.:::....|.|:|   .:...|.:|:.....|    
 Worm  2413 EEQV-----------EESKELREHIRQTEVRFENESSEMQQLKSDVEKLTVLIRENEQVLANDRR 2466

  Fly  3591 ----------LINGLSDEKHRWTNQSKEFKIQLGKLVGDVLLATGFLSY--CGPYNQEFRANLIK 3643
                      |:..|...:.||.:|.|:.:.:..:|||:.||.....::  |    ||....||.
 Worm  2467 LCDYRLRSGDLLAALEPHRKRWKSQLKQNEKKQKELVGNTLLFAIHRAHLLC----QEKAVTLIC 2527

  Fly  3644 TWM--GILKQKNIPFTTGL----NIINMLVDSSTVSEWTLQGLPNDELSVQNALIATKSSSYPLL 3702
            ..|  ..|..:|:.|.:.:    |:||.::.:...|......|...:..:||.......::|..:
 Worm  2528 VSMCTSHLTSQNVQFDSSMASSSNVINRILRTLKSSRRFCLFLSTTDSLLQNVRSVLPGATYLDI 2592

  Fly  3703 VDPQTQGKIWIKCKEDRNELQITSLNHKYFRTHLEDSLSLGRPLLIEDVGIDLDPVIDNVLEKNF 3767
            ..|.|    |   ||.  ::.::...|.|              .::..|..:|..|....:.:..
 Worm  2593 SPPLT----W---KEP--QMAVSLQKHVY--------------SIVPTVFYNLTEVPPPEMYEIL 2634

  Fly  3768 IKSGSIEKVLVGDKECDVMPGFMLYITTKLPNPAFSPEVSAK-TSIIDFTVTMRGLEDQ------ 3825
            :||.. ::|...:|..::....:.....|  |....|:...| ..:|..::.:..:||:      
 Worm  2635 MKSEE-KEVCYHNKPLELPDDILFVFVAK--NLGHIPDQIRKLMEVIVVSIPLEPIEDREKIERN 2696

  Fly  3826 ----LLGRVI---LMEKSDL--EAERVA 3844
                |||...   ::|..||  :|.::|
 Worm  2697 ELSSLLGEFTAADILESRDLTRKAMQIA 2724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9492NP_001287256.1 DHC_N1 283..843 CDD:285571
DYN1 1178..4372 CDD:227570 556/3083 (18%)
DHC_N2 1458..1861 CDD:285579 87/448 (19%)
P-loop_NTPase 1994..2222 CDD:304359 41/244 (17%)
P-loop_NTPase 2309..2444 CDD:304359 30/152 (20%)
P-loop_NTPase 2662..2926 CDD:304359 48/314 (15%)
P-loop_NTPase 3025..3287 CDD:304359 61/311 (20%)
MT 3300..3646 CDD:289543 84/385 (22%)
AAA_9 3674..3890 CDD:289547 33/187 (18%)
Dynein_heavy 4031..4713 CDD:281078
dhc-4NP_001338793.1 DHC_N2 599..990 CDD:369852 100/543 (18%)
SMC_prok_A <2413..>2502 CDD:274009 16/99 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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