DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fst and Prg4

DIOPT Version :10

Sequence 1:NP_524294.2 Gene:Fst / 41169 FlyBaseID:FBgn0037724 Length:286 Species:Drosophila melanogaster
Sequence 2:NP_067375.3 Gene:Prg4 / 96875 MGIID:1891344 Length:1221 Species:Mus musculus


Alignment Length:169 Identity:60/169 - (35%)
Similarity:92/169 - (54%) Gaps:10/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 PPPPTDLPELTTEDDVVSTT----DVTSPAEETTLAPEVPEESTSQAPEEITTGSEEGSGSSEDT 176
            |||.|..||.||..:...||    :.|:|.|.....|:.||.:|.:.|...|...|..:....:.
Mouse   358 PPPTTKKPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTPKEPPPTTKKPEPTTPKEPEP 422

  Fly   177 TTLAPEVPEESTTQAPEESTTDSEDGSGSEDTTQAPEETTTEEPEESTSEAPEESSSEAPEESTT 241
            ||  |:.||.:||:.||.:||...:.:    |.:.||.||.:|||.:|.:.||.::.:.||.:|.
Mouse   423 TT--PKEPEPTTTKEPEPTTTKEPEST----TRKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTTP 481

  Fly   242 EEPEESTTEAPVESTSEAPEESTTEAPEESTSEAPEEST 280
            :|||.:|.:.|..:|.:.||.:|.:.||.:|.:.||.:|
Mouse   482 KEPEPTTLKEPEPTTPKEPEPTTPKEPEPTTPKEPEPTT 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FstNP_524294.2 None
Prg4NP_067375.3 SO 26..68 CDD:197571
Somatomedin_B 69..106 CDD:460034
PHA03247 <446..761 CDD:223021 29/79 (37%)
PTZ00449 <634..938 CDD:185628
HX 959..1220 CDD:238046
Blue background indicates that the domain is not in the aligned region.

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