DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scm and MBTD1

DIOPT Version :10

Sequence 1:NP_731385.1 Gene:Scm / 41168 FlyBaseID:FBgn0003334 Length:877 Species:Drosophila melanogaster
Sequence 2:XP_011523224.1 Gene:MBTD1 / 54799 HGNCID:19866 Length:717 Species:Homo sapiens


Alignment Length:314 Identity:96/314 - (30%)
Similarity:146/314 - (46%) Gaps:38/314 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 DAYLEETGSEAAPAKCFKQAQNPPNND--FKIGMKLEALDPRNVTSTCIATVVGVLGSR-LRLRL 239
            |...::.|....|...|.:.:....:.  ||.||||||:||.|:::.|:||:..||... |.:.:
Human   380 DITKKQDGHFDTPPHLFAKVKEVDQSGEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGI 444

  Fly   240 DGS---DSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEEI 301
            |||   |..:.|.....|..|..:|.||.|...|.||.|:......|..||.:  ..::.||.::
Human   445 DGSEAADGSDWFCYHATSPSIFPVGFCEINMIELTPPRGYTKLPFKWFDYLRE--TGSIAAPVKL 507

  Fly   302 FQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDI 366
            |..:.|   .:.|:||.||||||...|:|||.|||..|....:.:.||||...:|.|.:..|.|:
Human   508 FNKDVP---NHGFRVGMKLEAVDLMEPRLICVATVTRIIHRLLRIHFDGWEEEYDQWVDCESPDL 569

  Fly   367 FPAGWCARSCHPMQPPGHKSRMD--SSSSKQR----------CPRPRYTVVAESEAMVPASPATA 419
            :|.|||..:.:.:|||..:|..:  |:||||:          ..:.|...:.:....:.:.|.| 
Human   570 YPVGWCQLTGYQLQPPASQSSRENQSASSKQKKKAKSQQYKGHKKKRKMPIGKKPVSLSSLPMT- 633

  Fly   420 HFHPNCKGG---PFINNSKLPCMVTGPTYQTLAKLCLQEVLAASTDTQQLSKLL 470
                   ||   .|..:.:|    |.|.|:||......|.....:.:::.|..|
Human   634 -------GGVRRSFSGDEEL----TPPPYRTLPAQTAPEAFPPPSTSREFSPSL 676

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ScmNP_731385.1 zf-FCS 58..95 CDD:428958
MBT_dScm_rpt1 196..294 CDD:439097 35/103 (34%)
MBT_dScm_rpt2 312..383 CDD:439100 31/70 (44%)
SLED 418..522 CDD:463469 13/56 (23%)
SAM_Scm 800..870 CDD:188977
MBTD1XP_011523224.1 MBT_MBTD1_rpt1 194..296 CDD:439110