| Sequence 1: | NP_001247006.1 | Gene: | Scm / 41168 | FlyBaseID: | FBgn0003334 | Length: | 877 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038966228.1 | Gene: | Scmh1 / 362581 | RGDID: | 1305788 | Length: | 718 | Species: | Rattus norvegicus |
| Alignment Length: | 752 | Identity: | 263/752 - (34%) |
|---|---|---|---|
| Similarity: | 342/752 - (45%) | Gaps: | 192/752 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 175 FDWDAYLEETGSEAAPAKCFKQAQNPPNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRL 239
Fly 240 DGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEEIFQP 304
Fly 305 EPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPA 369
Fly 370 GWCARSCHPMQPPGHK---SRMDSSSSKQRCPRPRYTVVAESEAMVPASPATAHFHPNCKGGPFI 431
Fly 432 NNSKLP-CMVTGPTYQTLAKLCLQEVLAASTDTQQLSKLLFALEGDVHIVTAAGKNFTVKIPSPM 495
Fly 496 RMKDDESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQLTQSATPPSSPVLADKRNRQ 560
Fly 561 SNSATTSPSEKIIKQEL------AVKSP-----VESKSKTSTNNGKEPASQ-------------- 600
Fly 601 -------------QNSNHSLNNNNNSASKSSNKVVIKSEPNGAN-AQTSSTTQALRKVRFQHHAN 651
Fly 652 TNTNSSATNGNQDTSQTTHVST-----SHCSSSSTSSSTSLAGGSANTSTIGKYLAPLVAEVHPE 711
Fly 712 --QANVKPSNSYYKSPTTLSSSASLPTSVSTP-FTGCQSASSTA-----LAAGGVTAAKAATAPA 768
Fly 769 GAAATAGASPSYTAITSPVSTPTSALANSHLRSQ---------PIDWTIEEVIQYIESNDNSLAV 824
Fly 825 HGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPALKI 861 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Scm | NP_001247006.1 | zf-FCS | 55..95 | CDD:283998 | |
| MBT | 178..273 | CDD:214723 | 70/94 (74%) | ||
| MBT | <312..382 | CDD:214723 | 41/69 (59%) | ||
| DUF3588 | 418..524 | CDD:288954 | 12/106 (11%) | ||
| SAM_Scm | 800..870 | CDD:188977 | 42/71 (59%) | ||
| SAM | 806..867 | CDD:197735 | 40/56 (71%) | ||
| Scmh1 | XP_038966228.1 | MBT | 85..180 | CDD:214723 | 70/94 (74%) |
| MBT | 191..289 | CDD:214723 | 55/97 (57%) | ||
| RBR | 324..373 | CDD:407329 | 14/124 (11%) | ||
| SLED | 411..519 | CDD:403384 | 17/112 (15%) | ||
| SAM_Scm | 645..715 | CDD:188977 | 41/62 (66%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 123 | 1.000 | Domainoid score | I5491 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG3766 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 406 | 1.000 | Inparanoid score | I1838 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D123551at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0005433 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45040 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_105988 | |
| Panther | 1 | 1.100 | - | - | O | PTHR12247 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X2741 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.920 | |||||