Protein Alignment Scm and Samuel

DIOPT Version :10

• Sequence 1: NP_731385.1
• Gene: Scm / 41168
• FlyBaseID: FBgn0003334
• Length: 877
• Species: Drosophila melanogaster
• Sequence 2: NP_525101.2
• Gene: Samuel / 34530
• FlyBaseID: FBgn0032330
• Length: 968
• Species: Drosophila melanogaster
• Alignment Length: 967
• Identity: 176/967 - (18%)
• Similarity: 291/967 - (30%)
• Gaps: 366/967 - (37%)

  Fly     7 SSTSSGSNSAAPGASTNATSSASASA------------------------------------SST 35
            ||:|..|:||....:|||.:::.|:|                                    :::
  Fly   158 SSSSMSSSSAGSTCTTNANTASVAAAYAAFYLEKVKHEKMDNHKDAPMVTIHNNNNNNTINNNNS 222

  Fly    36 STSASPGSTTSPASTQRQRGRPAKRATCTWCGEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYS 100
            |:|:|.....:..|:|...|...||..              |...:.......|..::.|.::
  Fly   223 SSSSSSSIINNHQSSQPSLGHSVKRER--------------LSPGSNSSSHNGELTVSSFARS-- 271

  Fly   101 KGACTQCDNVIRDGAPNKEFCSIMCMNKHQKKNCSTRHSGGSASG--------------KGLAES 151
                       |...|:               :.|.|.:||.|.|              :.|.:.
  Fly   272 -----------RSATPS---------------SSSYRGAGGGAGGGVSPSHQQQQQQQQQSLQQQ 310

  Fly   152 ERKLLASGAPAPTGPFQYESFHVFDWDAYLEETGSEAAPAKCFKQAQNPPNNDFKIGMKLEALDP 216
            :|      ...|:||    |.......:.|..:.|.:|.|.....|..        .|.|
  Fly   311 QR------LSPPSGP----SMATATTTSSLSSSSSASASASASASAAT--------HMPL----- 352

  Fly   217 RNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGF-RMNA 280
            .|:::..:.::.....|:.:||...|:|.::.....::|        :.:||.......| ..|.
  Fly   353 HNLSTNLLNSIQQAAASQQQLRSSNSNSSSNISGSSNNT--------KSDGGAASNATDFSTRNY 409

  Fly   281 SSWPGYLCKILNNAMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIH 345
            |.....|....|||             .|.:|
  Fly   410 SDIMRCLAAKYNNA-------------NPNDN--------------------------------- 428

  Fly   346 VTFDGWRGAFDYWCNYRSRDIFPAGWCARSCHPMQPPGHKSRMDSSSSKQRCPRPRYTVVAESEA 410
                          |...|:.:..|..:.:.......|.......|:|            |.|.|
  Fly   429 --------------NATRRNSYYDGSTSATTATGGAGGGGGGAGGSNS------------APSSA 467

  Fly   411 MVPASPATAHFHPNCKGGPFINNSKLPCMVTGPTYQTLAKLCLQEVLAASTDTQQLSKLLFALEG 475
            :..||.:                       ||.|..|..||......||::....|||     |.
  Fly   468 LKTASSS-----------------------TGSTTTTAKKLSPSAASAANSAAVSLSK-----ES 504

  Fly   476 DVHIVTAAGKNFTVKIPSPMRMKDDESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQ 540
            .|..|..||....|                                          ..:......
  Fly   505 KVSAVGGAGVGGAV------------------------------------------ASSGGGGSS 527

  Fly   541 LTQSATPPSSPVLADKRNRQS----NSATTSP---------------------SEKIIKQELAVK 580
            ::|.|.||::|...::...|.    .:|:.||                     ::.::....|||
  Fly   528 MSQLAPPPTAPSPTEQAKSQMAAVVAAASVSPFMTNFLPFSSGIFPPLIDMSSTQALLTLARAVK 592

  Fly   581 SP-----VESKSKTSTNNGKEP----ASQQNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSS 636
            ..     :.||.:.|.:|...|    |....|:.:||...:.|::.....:|.|      ||...
  Fly   593 DAEIQEILRSKQQRSGSNASSPSASAAGTPRSSSTLNAALHQAAQFVTPALIYS------AQLQQ 651

  Fly   637 TTQALRKVRFQHHANTNTNSSATNGNQDTSQTTHVSTSHCSSSSTSSSTSLA------GGSANTS 695
            ..|..::   ||.            .|...|:.|.| ...|..||:.||::|      |||:..|
  Fly   652 QQQQQQQ---QHQ------------RQQQQQSQHAS-RQSSPRSTNDSTTVAPIGDGGGGSSIAS 700

  Fly   696 TIGKYLAPLVAEVHPEQANVKPSNSYYKSPTTLSSSASLPTSVSTPF-----------TGCQSAS 749
            .     |||.....|..|....:.....|..|.:::|:..:|.|||.           :|..:|:
  Fly   701 A-----APLDLSSQPPAAKRFKAERRASSTATTATTATTGSSTSTPSPPPLEQHDDINSGNANAT 760

  Fly   750 STALAAGGVTAAKAATAPAGAAATAGASPSYTAITSPVSTPTSALANSHLRSQPID-WTIEEVIQ 813
            ....:..|...:.||.:.||.|                    .|......:|:.:: |::::|..
  Fly   761 LGTRSGTGTGESSAAGSGAGVA--------------------KARRRCQAQSEEVNSWSVDDVCG 805

  Fly   814 YIESNDNSLAVHGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPALKICNLVNKVNG 870
            ::...| ..|.:...||...|||..|.||..:.::..:|:|||||||:.:::.|..|
  Fly   806 FVGGID-ICAEYVQSFRDQSIDGTGLPLLTEDHLVNSLGMKLGPALKLRSILAKKLG 861

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scm	NP_731385.1	zf-FCS	58..95	CDD:428958	4/36 (11%)
		MBT_dScm_rpt1	196..294	CDD:439097	17/98 (17%)
		MBT_dScm_rpt2	312..383	CDD:439100	4/70 (6%)
		SLED	418..522	CDD:463469	17/103 (17%)
		SAM_Scm	800..870	CDD:188977	22/70 (31%)
Samuel	NP_525101.2	SAM_Samd7,11	795..862	CDD:188978	22/68 (32%)