Sequence 1: | NP_001247006.1 | Gene: | Scm / 41168 | FlyBaseID: | FBgn0003334 | Length: | 877 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003748714.1 | Gene: | L3mbtl3 / 309550 | RGDID: | 1305474 | Length: | 868 | Species: | Rattus norvegicus |
Alignment Length: | 968 | Identity: | 239/968 - (24%) |
---|---|---|---|
Similarity: | 356/968 - (36%) | Gaps: | 227/968 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 SSTSSGSN-------------SAAPGAS--------------TNATSSASA-SASSTSTSASPGS 43
Fly 44 TTSPAS--TQRQRGRPAKRATCTWC-----GEGKLPLQYVLPTQTGKKEFCSETCIAEFRKAYSK 101
Fly 102 GA--------CTQ-CDNVI--------RDGAPNKEFCSIMCMNKHQKK---------------NC 134
Fly 135 STRHSGGSASGKGLAESERK----LLASGAPAPTGPFQYESFHVFDWDAYLEETGSEAAPAKCFK 195
Fly 196 QAQNPP--NNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIH 258
Fly 259 AIGHCEKNGGMLQPPLGFRMNASSWPGYL--CKILNNAMVAPEEIFQPEPPEPEENLFKVGQKLE 321
Fly 322 AVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPAGWCARSCHPM-QPPGHK 385
Fly 386 SRMDSSSSKQRCPRPRYTVVAESEAMVPASPATAHFHPNCKGGPFINNSKLPCM-VTGPTYQTLA 449
Fly 450 KLCLQEVLAASTDTQQLSKLLF------------ALEGDVHIVTAAGK-NFTVKIP-SPMRMKDD 500
Fly 501 ESLAQFIETLCTT--CRACANLISLVHETEECKKCANSRKRQL-TQS-ATPPSSPVLADKRNRQS 561
Fly 562 NSATTSPSEKIIKQELAVKSPVES----KSKTSTNNGKEPASQQNSNHSLNNNNNSASKSSNKV- 621
Fly 622 ------VIKSEPNGANAQTSSTTQALRKVRFQHHANTNTNSSATNGNQDTSQTTHVSTSHCSSSS 680
Fly 681 TSSSTSLAGGSANTSTIGKYLAPLVAEVHPEQANVKPSNSYYKSPTTLSSSASLPTSVSTPFTGC 745
Fly 746 QSASSTALAAGGVTAAKAATAPAGAAATAGAS---PSYTAITSPVSTPTSALANSHLRSQPIDWT 807
Fly 808 IEEVIQYIESNDNSLAVHGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPALKICNLV 865 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Scm | NP_001247006.1 | zf-FCS | 55..95 | CDD:283998 | 7/44 (16%) |
MBT | 178..273 | CDD:214723 | 42/96 (44%) | ||
MBT | <312..382 | CDD:214723 | 31/70 (44%) | ||
DUF3588 | 418..524 | CDD:288954 | 25/122 (20%) | ||
SAM_Scm | 800..870 | CDD:188977 | 25/66 (38%) | ||
SAM | 806..867 | CDD:197735 | 25/60 (42%) | ||
L3mbtl3 | XP_003748714.1 | MBT | 235..331 | CDD:214723 | 42/95 (44%) |
MBT | 342..438 | CDD:214723 | 39/99 (39%) | ||
MBT | 450..542 | CDD:214723 | 24/112 (21%) | ||
SAM_Scm-like-3MBT3,4 | 793..858 | CDD:188981 | 25/72 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |