Sequence 1: | NP_001247006.1 | Gene: | Scm / 41168 | FlyBaseID: | FBgn0003334 | Length: | 877 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001346193.1 | Gene: | Scml4 / 268297 | MGIID: | 2446140 | Length: | 490 | Species: | Mus musculus |
Alignment Length: | 595 | Identity: | 128/595 - (21%) |
---|---|---|---|
Similarity: | 192/595 - (32%) | Gaps: | 240/595 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 351 WRGAFDYWCNYRSRDIFPAGWCARSCHPM------------------QPPGHKSRMD-------- 389
Fly 390 -SSSS-------KQRCPRPRYTV------------------------VAESEAMVP------ASP 416
Fly 417 ATAHFHPNCKGGPFINNSKLPCMV--TGPTYQTLAKLCLQEVLAASTDTQQLSKLLFAL-----E 474
Fly 475 GDVHIVTAA--GKNFTVKIPSPMRMKDDESLAQFIETLCTTCRA--CANLISLVHETEECKKCAN 535
Fly 536 SRKRQLTQSATP-PSSPVLADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTSTNNGKEPAS 599
Fly 600 QQNSNHSLNNNNNSASKSSNKVVIKSEPNGANAQTSSTTQALRKVRFQHHANTNTNSSATNGNQD 664
Fly 665 TSQTTHVSTSHCSSSSTSSSTSLAGGSANTSTIGKYLAPLVAEVHPEQANVKPSNSYYKSPTTLS 729
Fly 730 SSASLPTSVSTPFTGCQSASSTALAAGGVTAAKAATAPAGAAATAGASPSYTAITSPVSTPTSAL 794
Fly 795 ANSHLRSQPIDWTIEEVIQYIESND-NSLAVHGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPA 858
Fly 859 LKICNLVNKV 868 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Scm | NP_001247006.1 | zf-FCS | 55..95 | CDD:283998 | |
MBT | 178..273 | CDD:214723 | |||
MBT | <312..382 | CDD:214723 | 7/48 (15%) | ||
DUF3588 | 418..524 | CDD:288954 | 27/116 (23%) | ||
SAM_Scm | 800..870 | CDD:188977 | 38/70 (54%) | ||
SAM | 806..867 | CDD:197735 | 36/61 (59%) | ||
Scml4 | NP_001346193.1 | RBR | 83..142 | CDD:319226 | 11/58 (19%) |
SLED | 177..285 | CDD:314933 | 26/116 (22%) | ||
SAM_Scm | 416..487 | CDD:188977 | 39/82 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7846 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3766 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D123551at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12247 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.970 |