Protein Alignment Scm and LOC100330797

DIOPT Version :10

• Sequence 1: NP_731385.1
• Gene: Scm / 41168
• FlyBaseID: FBgn0003334
• Length: 877
• Species: Drosophila melanogaster
• Sequence 2: XP_073795615.1
• Gene: LOC100330797 / 100330797
• -ID: -
• Length: 703
• Species: Danio rerio
• Alignment Length: 775
• Identity: 265/775 - (34%)
• Similarity: 352/775 - (45%)
• Gaps: 182/775 - (23%)

  Fly   175 FDWDAYLEETGSEAAPAKCFKQAQNPPNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRL 239
            |.|:.||:||.|..||..||:|::.||:||||:||||||.||||.||||||||:|::|:||||||
Zfish    34 FSWEDYLKETASVPAPHSCFRQSRVPPSNDFKVGMKLEARDPRNSTSTCIATVMGLMGARLRLRL 98

  Fly   240 DGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFRMNASSWPGYLCKILNNAMVAPEEIFQP 304
            ||||:.|||||||||.:|..||.|||||.||||||||||||||||.:|.:.||.|.:||...|:.
Zfish    99 DGSDNTNDFWRLVDSADIQPIGTCEKNGDMLQPPLGFRMNASSWPMFLLRTLNGAEMAPAMAFKK 163

  Fly   305 EPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDGWRGAFDYWCNYRSRDIFPA 369
            ||..|.:|.|:.|.||||||:|||.|||.|||..:|.:::.|.||||||||||||.|.|||:||.
Zfish   164 EPLRPLQNTFRAGLKLEAVDRKNPYLICPATVGEVKGEELFVMFDGWRGAFDYWCRYDSRDLFPV 228

  Fly   370 GWCARSCHPMQPPGHKSRM-------DSSSSKQRCPRPRYTVVAESEAMVPASPATAHFHPNCKG 427
            |||:.:.|.:||||:...:       .||||..:..|..........|.|||.|..       ||
Zfish   229 GWCSATQHGLQPPGNSLGLPKAAPASSSSSSVPKLSRRSVLPPLRLPAAVPALPVR-------KG 286

  Fly   428 GPFINNSKLPCMVTG--PTYQTLAKLCLQEVLAASTDTQQLSKLLFALEGDVHIVTAAGKNFTVK 490
                        :.|  |..:|||                   ||.||       ||.|..
Zfish   287 ------------IRGRRPKSETLA-------------------LLKAL-------TAPGAQ---- 309

  Fly   491 IPSPMRMKDDESLAQFIETLCTTCRACANLISLVHETEECKKCANSRKRQLTQSATPPSS---PV 552
              ||..::|.....|.:.|                ......|..:.:|.:|.||:|....   |:
Zfish   310 --SPQELQDTPLSQQPLRT----------------HRRRGPKPGSKKKPRLQQSSTAAEDDRIPI 356

  Fly   553 LADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTSTNNGKEPASQQNSNHSLNNNNNSASKS 617
            :              ||:.:  ..||..|.|.|......|.........:........::...::
Zfish   357 M--------------PSDGL--SPLACSSSVVSTVCVYVNKHGNCGPHLDRKQLQKLPDHFGPEA 405

  Fly   618 SNKVV--------------------IKSEPNGANAQTSSTTQALRKV------------RFQHHA 650
            :|.|:                    ::||..|.......|...:|.|            ||....
Zfish   406 ANLVLQQTIQACLDCTYQPTVLLRCLQSEGGGGETVRVRTDGGVRLVKLPSASSAGFVLRFLERV 470

  Fly   651 NTNTNSSATNGNQDTSQTTHVSTSHCSSSSTSSSTSLAGGSANTST------IGKYLAPLV---- 705
            ...........:|..|..||..::|..:.:......|...|.:...      ...|.|||.
Zfish   471 CRQLQCDHLFSSQPFSPHTHTHSAHERTKTVKEELLLDSASLHRGVKRICRESPPYCAPLSPKLL 535

  Fly   706 -AEVHPEQANVKP----------------SNSYYKSPTTLSSSASLPTSVSTPFTGCQSASSTAL 753
             .:.||.:|...|                |||....|.|..|:....|..::|:..
Zfish   536 HTDTHPSEAETLPPEDSGSPKEQRFMDSASNSMTPRPQTSRSTLDYQTPPNSPYYH--------- 591

  Fly   754 AAGGVTAAKAATAPAGA-----AATAGASPSYTAITSPVSTPTSALANSHLRSQPIDWTIEEVIQ 813
            ..|.....:.:..||..     ||::...|....:.:|..:|||             |:||||:|
Zfish   592 GNGPAVRRQPSNPPAHTHRRVEAASSTTGPESVELKTPGRSPTS-------------WSIEEVMQ 643

  Fly   814 YIESND-NSLAVHGDLFRKHEIDGKALLLLNSEMMMKYMGLKLGPALKICNLVNKVNGRR 872
            ::...| .:|..|.:|||||||||||||||.|:|:|||||||||||||:|:.::.:..|:
Zfish   644 FVRDADPTALGPHAELFRKHEIDGKALLLLRSDMVMKYMGLKLGPALKLCHHIDTLKQRK 703

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scm	NP_731385.1	zf-FCS	58..95	CDD:428958
		MBT_dScm_rpt1	196..294	CDD:439097	73/97 (75%)
		MBT_dScm_rpt2	312..383	CDD:439100	44/70 (63%)
		SLED	418..522	CDD:463469	19/105 (18%)
		SAM_Scm	800..870	CDD:188977	40/70 (57%)
LOC100330797	XP_073795615.1	None