DRSC/TRiP Functional Genomics Resources

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Protein Alignment SpdS and SPDS2

DIOPT Version :9

Sequence 1:NP_001247005.1 Gene:SpdS / 41167 FlyBaseID:FBgn0037723 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_177188.1 Gene:SPDS2 / 843367 AraportID:AT1G70310 Length:340 Species:Arabidopsis thaliana


Alignment Length:291 Identity:137/291 - (47%)
Similarity:200/291 - (68%) Gaps:9/291 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSLNNGWFSELQADLWPGQSFSLKVKEVIHKEKSRFQDIQIVETETYGRCLILDGIIQCTARDE 65
            |.|:..|||||: :.:|||::.||||::::.:.||.:||:.:.::.|||:.|:|||:||.|.|||
plant    44 MSSIIPGWFSEI-SPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDE 107

  Fly    66 FSYQEMISFLPLCAHPNPKKVLIVGGGDGGVAREVVKHPLVEEVHQVEIDDRVVELSKQYLPAMA 130
            .:|||||:.||||:..||||||::|||||||.|||.:|..||::...|||..||:::|||.|.:|
plant   108 CAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVA 172

  Fly   131 CGFANEKLKLTIGDGFDYMKK-HKNEFDVIITDSSDPIGPAVSLFQESYYELMKHALKDDGIVCS 194
            .|:.:.::.|.||||..::|. .:..:|.:|.|||||||||..||::.::|.:..||:..|:||:
plant   173 VGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPIGPAKELFEKPFFESVNRALRPGGVVCT 237

  Fly   195 QGGSFWLDLDYIKKTMSGCKEHF-AKVAYAVTSVPSYPCGHIGFVMGSLNKNQ-DFATP----KL 253
            |..|.||.:|.|:..:|.|::.| ..|.||.||||:||.|.|||::.|....| ||..|    ..
plant   238 QAESLWLHMDIIEDIVSNCRDIFKGSVNYAWTSVPTYPSGVIGFMLCSSEGPQVDFKKPVSLIDT 302

  Fly   254 GKSEIDS-IDLRYYSSEVHSAAFALPRWVQK 283
            .:|.|.| ..|:||::|:|||||.||.:.:|
plant   303 DESSIKSHCPLKYYNAEIHSAAFCLPSFAKK 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SpdSNP_001247005.1 AdoMet_MTases 1..283 CDD:302624 136/289 (47%)
SPDS2NP_177188.1 PLN02366 35..340 CDD:215208 137/291 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 185 1.000 Domainoid score I997
eggNOG 1 0.900 - - E1_COG0421
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40514
Inparanoid 1 1.050 269 1.000 Inparanoid score I925
OMA 1 1.010 - - QHG54216
OrthoDB 1 1.010 - - D1059849at2759
OrthoFinder 1 1.000 - - FOG0002410
OrthoInspector 1 1.000 - - otm2699
orthoMCL 1 0.900 - - OOG6_100634
Panther 1 1.100 - - O PTHR11558
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1601
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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